Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., flagellum-specific ATP synthase FliI from Phaeobacter inhibens DSM 17395

 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%)

Query: 161 VLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQ 220
           V +   PI KGQR  + A    GK+ LL  +AQ++ ++    V+++ LI ER  EV    
Sbjct: 149 VFNTILPIVKGQRVGLFAGSGVGKSTLLATLAQNMEAD----VVVIALIGERGREVNHFV 204

Query: 221 RLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARA 273
           + V G+       VVA+T D+ A    + A   +  A+   +  K+V+ L DS+TR A A
Sbjct: 205 KDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAVAEHFRDQGKNVLFLADSVTRFAEA 264

Query: 274 YNTVVPASGKV--LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVI 331
           +  +  +SG+   L G   +           A     + G +T I + LV  GS MDE I
Sbjct: 265 HREIAVSSGEAPALRGYPPSVTPLITGLCERAGPGSGDQGDITAIFSVLV-AGSDMDEPI 323

Query: 332 YEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPMG 391
            +  +G  +  + LNR+IAE+  FPA+D +RS +R        DE   +  +RK    +G
Sbjct: 324 ADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSLPAAATADENSAILDVRKY---LG 380

Query: 392 ETDAMEFLIDKLAMTKTNDEFFD 414
             +  E +I     ++ ND   D
Sbjct: 381 AYEQSEVMIRAGLYSEGNDVTLD 403