Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., transcription termination factor rho from Marinobacter adhaerens HP15

 Score =  257 bits (657), Expect = 3e-73
 Identities = 129/258 (50%), Positives = 186/258 (72%)

Query: 154 TEDITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERP 213
           +E +T R +DL  PIG GQRGLIVAPP +GK+ +L++I Q++   +PE  L  LLIDERP
Sbjct: 39  SEQLTVRAMDLITPIGMGQRGLIVAPPGSGKSTVLKHICQAVGKAYPEIKLYALLIDERP 98

Query: 214 EEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARA 273
           EEVT+ +R V  EV AS+ DE  + HV+VA+ +++ A++      +V+I++DS+TRL+R 
Sbjct: 99  EEVTDFRRSVPAEVHASSSDESYAHHVRVADELLDIARQQAGEGHNVMIVIDSLTRLSRV 158

Query: 274 YNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYE 333
           +N    +SG+ ++GG+DA A+  P+R FGAARN+E GGSLTI+AT LVDTGS+MD+VI+E
Sbjct: 159 HNAERKSSGRTMSGGMDARAMEIPRRLFGAARNIENGGSLTILATVLVDTGSRMDQVIFE 218

Query: 334 EFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPMGET 393
           EFKGTGNMEL L+R +A +R+FPA+D ++S TRREELL    +L K+  LR+ +  +   
Sbjct: 219 EFKGTGNMELVLSRDVANQRIFPALDISKSSTRREELLLDPKDLDKIRALRRALGGLKPL 278

Query: 394 DAMEFLIDKLAMTKTNDE 411
           +  + L++ L    TN E
Sbjct: 279 EGTKKLVELLEKYPTNAE 296