Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., ATPase, FliI/YscN family from Sphingomonas koreensis DSMZ 15582

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 15/295 (5%)

Query: 101 IRPPKEGERYFALLKVNTVNDDRPDNARNKILFENLTPLHANERMVMERGNGSTE-DITA 159
           + PP E E   A+L        +P +    I      PL    +  ++RG      D+  
Sbjct: 90  VGPPGEAEVGAAMLGRVVDGAGKPIDGLGPIRGAGKWPLAGKIQSPLDRGRVLQPLDVGV 149

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTE- 218
           R ++    IG+GQR  I+A    GK++LL  + ++  ++    V+++ LI ER  EV++ 
Sbjct: 150 RAINGLLTIGQGQRVGIMAGSGVGKSVLLGMMVRAAKAD----VIVIGLIGERSREVSDF 205

Query: 219 MQRLVKGE------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLAR 272
           ++  V GE      VVA   +      ++ A      A+      K V++++DS+TR+A 
Sbjct: 206 LETKVAGEARARSVVVAVPANHSPVLRIRGALRATAIAEAFRNEGKKVLLIMDSLTRVAH 265

Query: 273 AYNTVVPASGKVLTG-GVDANALHR-PKRFFGAARNVEEGGSLTIIATALVDTGSKMDEV 330
           A   +  A G+  +  G   +A+   P     A  +V  GGS+T I T L D     D V
Sbjct: 266 AGREIGLALGEPASARGYPPSAIAMLPSLIERAGTDVHTGGSITAIYTVLADGDDGNDPV 325

Query: 331 IYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRK 385
           + +  +   +  + L+R +AE+ V+PAID   S +R    +   + +    +LR+
Sbjct: 326 V-DSARSILDGHIVLSRALAERGVYPAIDLGPSVSRVMTDIADKEHVAAARVLRR 379