Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., type III secretion system ATPase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 14/245 (5%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEM 219
           RVLD     G+GQR  I A    GK+ LL +I +  +++    V ++ LI ER  EV E 
Sbjct: 150 RVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSAD----VCVLALIGERGREVREF 205

Query: 220 -------QRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLAR 272
                  +   K  +V ST D  +   ++ A      A+   + ++ V++++DS+TR  R
Sbjct: 206 IEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRFGR 265

Query: 273 AYNTVVPASGKVLT-GGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVI 331
           A   +  A+G+  T  G   +      R    A N  + GS+T + T LV+ G  M E I
Sbjct: 266 AQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGN-SDRGSITALYTVLVE-GDDMTEPI 323

Query: 332 YEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPMG 391
            +E +   +  + L+RK+A    +PAID   S +R    +   +       LRKI+    
Sbjct: 324 ADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVGKEHKGAAQKLRKILAKYA 383

Query: 392 ETDAM 396
           E + +
Sbjct: 384 EVELL 388