Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., flagellum-specific ATP synthase FliI (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 17/253 (6%)

Query: 124 PDNARNKILFENLTPLHANERMVMERGNGSTE-DITARVLDLAAPIGKGQRGLIVAPPKA 182
           P +    ++ E   PL+A+    + R    T  D+  R ++    +G+GQR  I+A    
Sbjct: 111 PLDGGTPVMPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLTLGRGQRVGIMAGSGV 170

Query: 183 GKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQR-------LVKGEVVASTFDEP 235
           GK+ L+  +A+   +     V ++ LI ER  EV E          + +  +V +T D+ 
Sbjct: 171 GKSTLMGMMARYTEAQ----VNVIGLIGERGREVVEFMEKDLGPEGMARSVLVVATSDQS 226

Query: 236 ASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLT--GGVDANA 293
               ++ A      A+   +  KDV++++DS+TR A A   V  A G+  T  G      
Sbjct: 227 PLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVF 286

Query: 294 LHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKR 353
              P+    A R+ E  G++T I T LVD G   +E I +  +   +  + L R++A++ 
Sbjct: 287 AQLPRLLERAGRSPE--GTITGIYTVLVD-GDDFNEPIADAVRSILDGHIVLTRELADQG 343

Query: 354 VFPAIDFNRSGTR 366
            FPAID  +S +R
Sbjct: 344 HFPAIDVLKSISR 356