Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ATPase, FliI/YscN family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 29/270 (10%)

Query: 161 VLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQ 220
           V +   P+ +GQR  + A    GK+ LL  + +S+ ++    + +V LI ER  EV E  
Sbjct: 149 VFNTFLPLVRGQRLGLFAGSGVGKSTLLGKLTRSVQAD----IAVVALIGERGREVREFV 204

Query: 221 RLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARA 273
               G        VVA+T D+      + A + +  A+   +    V+ L DS+TR A A
Sbjct: 205 DRTLGADGMKRAIVVAATSDQAPLLKRRAAWLAMSIAEYFRDLGGHVLFLTDSVTRFAEA 264

Query: 274 YNTVVPASGKV--------LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGS 325
           +  V   +G+          TG +  +   R      A    E  G +T I + LV  GS
Sbjct: 265 HREVALTAGEAPSMRGFPPSTGQMIMDLAER------AGPGPEGKGDITGIFSVLV-AGS 317

Query: 326 KMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRK 385
            MDE + +  +G  +  + L+R+IAE+  FPA+D  +S +R         E + + + R+
Sbjct: 318 DMDEPVADILRGVLDGHVVLSREIAERGRFPAVDVLQSVSRSLPDAASAAENELLQLARR 377

Query: 386 IVHPMGETDAMEFLIDKLAMTKTNDEFFDA 415
               MG  +    +I     T+ +D   DA
Sbjct: 378 ---TMGIYERSRLMIQSGLYTQGSDAEIDA 404