Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella sp. ANA-3

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 17/258 (6%)

Query: 134 ENLTPLHANERMVMERGNGSTE--DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNI 191
           E   P H+N    + R    TE  D+  R ++    +GKGQR  + A    GK++LL  +
Sbjct: 125 EQQAPRHSNAINPLSR-RAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMM 183

Query: 192 AQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGE-------VVASTFDEPASRHVQVAE 244
            +   ++    +++V L+ ER  EV E    + GE       VVA+  D      ++  E
Sbjct: 184 TRGTTAD----IIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239

Query: 245 MVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGK-VLTGGVDANALHRPKRFFGA 303
                A+   +   +V++L+DS+TR A+A   +  A G+   T G   +   +  R    
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 304 ARNVEEG-GSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNR 362
           A N   G GS+T   T L + G    + I +  +   +  + L+R +A+   +PAID   
Sbjct: 300 AGNGGPGQGSITAFYTVLTE-GDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEA 358

Query: 363 SGTRREELLTKTDELQKM 380
           S +R   ++   + L+ M
Sbjct: 359 SISRVAPMVISNEHLEAM 376