Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., DEAD/DEAH box helicase domain protein from Marinobacter adhaerens HP15

 Score =  283 bits (725), Expect = 6e-81
 Identities = 157/414 (37%), Positives = 229/414 (55%), Gaps = 11/414 (2%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F+  GL  Q++     +G+   +PIQA A+P +LSG+D+   AQTGTGKT  F       
Sbjct: 3   FSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLLQR 62

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           L   P    R    PRA+I+ PTRELA Q+ +           KAA+ +GG   + Q+ K
Sbjct: 63  LGENP----RTGKGPRALILTPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKINPQMMK 118

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           L+ G+D+L+ T GR++D Y+Q     N ++ +VLDEADRM D+GFI+DIR +   +P   
Sbjct: 119 LRKGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAK- 177

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
            R N+LFSAT S  ++ LA   ++NP  V V     +   I++ ++      K ALL  L
Sbjct: 178 -RQNLLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKL 236

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           + +   D+ ++F  TKH   ++   L  D      + G+  Q  R R L  F  G+V +L
Sbjct: 237 VRDNSWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVL 296

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           VATD+AARGL I Q+  V N++LP+  EDYVHRIGRTGRAG SGH++S    +    L  
Sbjct: 297 VATDIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAG 356

Query: 371 IESYIEHAIPTSDYDPSALLTDLPAPLSLRSSPQQRRTNTAGSRNSNNGGNRKP 424
           IE  I+  +P ++ +      +LP     ++ P + R     +RN N GGN +P
Sbjct: 357 IERLIKKQLPRTEVEGFEPTNNLPLKPKAKADPSRAR-----NRNGNGGGNGRP 405