Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  271 bits (692), Expect = 4e-77
 Identities = 159/426 (37%), Positives = 234/426 (54%), Gaps = 13/426 (3%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL P+++  + ++G+V  TPIQ  A+P +L G+D+   AQTGTGKT  F      H
Sbjct: 3   FDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQH 62

Query: 71  LLTT-PAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLA 129
           L+   P A+GR     RA+I+ PTRELA QI  +         +++ + +GG S + Q+ 
Sbjct: 63  LVQKEPHAKGRRPV--RALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM 120

Query: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
           KL+SGVDIL+ T GR++D   Q   +L+ ++ +VLDEADRM D+GFI DIR +  ++P  
Sbjct: 121 KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQT 249
             R N+LFSAT S  ++ LA + ++NP  + V        ++ + + +   + K  LL  
Sbjct: 181 --RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQ 238

Query: 250 LIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDI 309
           +I E    + ++F  TKH    +   L  D  R   + G+  Q  R R L  F  G + +
Sbjct: 239 MIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRV 298

Query: 310 LVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLP 369
           LVATD+AARGL I ++ HV NY+LP+  EDYVHRIGRTGRA A+G ++S  C +    L 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLH 358

Query: 370 AIESYIEHAIP---TSDYDPSALLTDLPAPLSLRSSPQQRRTNTAGSRNSNNG--GNRKP 424
            IE  ++  IP    + Y+P   +   P         QQR     G ++   G  G  + 
Sbjct: 359 DIERLLKKEIPRIALAGYEPDPSIKAEPIQ---NGRQQQRGGGGRGGQSQGRGGQGQGRG 415

Query: 425 QQRRPR 430
           QQ  PR
Sbjct: 416 QQSAPR 421