Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., ATP-dependent RNA helicase RhlE from Enterobacter sp. TBS_079

 Score =  273 bits (699), Expect = 6e-78
 Identities = 163/429 (37%), Positives = 234/429 (54%), Gaps = 18/429 (4%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL P+++  + ++G+V  TPIQ  A+P +L G+D+   AQTGTGKT  F       
Sbjct: 3   FDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLEL 62

Query: 71  LLTT-PAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLA 129
           L+   P A+GR     RA+I+ PTRELA QI  +         +++ + +GG S + Q+ 
Sbjct: 63  LVKNQPHAKGRRPV--RALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM 120

Query: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
           KL+ GVD+L+ T GR++D   Q    L+ I+ +VLDEADRM D+GFI DIR +  ++P P
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLP-P 179

Query: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQT 249
           + R N+LFSAT S  ++ LA + ++NP  V V        +I + + +   + K  LL  
Sbjct: 180 R-RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSH 238

Query: 250 LIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDI 309
           +I +    + ++F  TKH    +   L  D  R   + G+  Q  R R L +F  GD+ +
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRV 298

Query: 310 LVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLP 369
           LVATD+AARGL I ++ HV NY+LP+  EDYVHRIGRTGRA A+G ++S  C +    L 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358

Query: 370 AIESYIEHAIP---TSDYDPSALLTDLPAPLSLRSSPQQRRTNTAGSRNSNNGGNRKPQQ 426
            IE  +   IP   T  YD            S+++ P Q      G R    GG R  Q 
Sbjct: 359 DIERLLRKEIPRIETPGYDVDP---------SIKAEPIQNGRQGGGGR-GQGGGGRSQQP 408

Query: 427 RRPRAPRPK 435
           RR     PK
Sbjct: 409 RRSEGGAPK 417