Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1156 a.a., Sensory box histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 585/1158 (50%), Positives = 801/1158 (69%), Gaps = 31/1158 (2%)

Query: 5    LVIPVSLAYLGVLFLIAWYGDRQTRWLA-NWRPWIYSLSIAVYCTSWTFYGTVGQASVNP 63
            L+  V+LAY+ ++F IA+YGDR++  L    R W+YSLS+AVYCTSWTF+G VGQA+   
Sbjct: 7    LIAVVALAYMAIMFAIAFYGDRRSTPLPPRVRAWVYSLSLAVYCTSWTFFGAVGQAAEQL 66

Query: 64   WSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVL 123
            WSFLPIY+ PIL+ V    VL ++++I+K+E+ITS+ADFIAARYGKSQ LAV V +I ++
Sbjct: 67   WSFLPIYLGPILLLVLAPWVLQKMVMISKQENITSIADFIAARYGKSQSLAVVVALICLV 126

Query: 124  GILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEH 183
            G+LPYIALQL+GI +G+N++        G +    +  V L LALFT++FGTR++D TEH
Sbjct: 127  GVLPYIALQLKGIVLGVNLLIGAGADAMGTRAQDTALIVSLILALFTIVFGTRNLDATEH 186

Query: 184  HRGMMMAIAFESIVKLVAFLCVGVFIAYLAWR--TDGLELSTIAASTYQ----APNWPTL 237
            HRGM++AIAFES+VKL AFL VG F+ Y  +    D    + +A    Q      NWP++
Sbjct: 187  HRGMVLAIAFESLVKLFAFLAVGAFVTYGLYDGFDDLFNQAMLAPRLEQYWKETINWPSM 246

Query: 238  LIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQGLL 297
            ++ T + M+AI+CLPRQFH  VVEN  PQDL  A+W+FP YL L +LFV+PIA  GQ +L
Sbjct: 247  VVQTGVAMMAIICLPRQFHVTVVENIEPQDLRLAKWVFPAYLALAALFVVPIALAGQMML 306

Query: 298  PNTS-PDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLLLR 356
            P++  PD+FVISLP+      +A+LAF+GG SAA+GMVIV+++AL+ MVSND+++P LLR
Sbjct: 307  PSSVLPDSFVISLPLAQAHPALAVLAFIGGASAATGMVIVASVALSTMVSNDMLLPWLLR 366

Query: 357  RMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFAP 416
            R   ++R    F   ++ +RR  I+++L  A+  Y +L S  SL+ IG ++F+A+TQ AP
Sbjct: 367  RNN-AERPFEVFRQWMLSVRRVSIVVILLLAYVSYRLLGSTASLATIGQIAFAAVTQLAP 425

Query: 417  AIFGGMYWREGNRKGVYVGLAVGFTLWLITLM---SATDMLAGDASNNVLLWVITPPDWL 473
            A+ G +YW++ NR+GV+ GLA+G  LW  TL+   +A  +     S   L W+   P   
Sbjct: 426  AMLGALYWKQANRRGVFAGLAMGIFLWFYTLVLPIAAHSLGWSLTSFPGLAWLHGNP--- 482

Query: 474  VALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMSLYQSR 533
            + L +     G++LS+  N   +  VS+++R  +SE  QA  F+G  +    N     + 
Sbjct: 483  LNLPITPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQEISARPNPRSMLA- 541

Query: 534  VTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAGVFGASS 593
            V + +L  LA+RFVG  R R +F ++  +Q +   P Q A S  I HTER+LAGV GASS
Sbjct: 542  VHIEDLLQLAARFVGEERARQSFIRFAYRQGKGFNPTQNADSEWIAHTERLLAGVLGASS 601

Query: 594  AKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAW 653
             + V+ +A++GR+MQLE+V  I DEASE+  F+R LLQGAIE+I QGI+VVD+ LRLVAW
Sbjct: 602  TRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENISQGISVVDQSLRLVAW 661

Query: 654  NQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSR 713
            N+RYLELF++P GLI VGRPIAD+IR+NA++GLCGPG+ E HV RR++ + QG +HTS R
Sbjct: 662  NRRYLELFKYPDGLISVGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSER 721

Query: 714  VRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNK 773
            +  +GRVIE+ GNPMPGGGFVMSFTDIT FREA Q+L  ANE LE+RV +RT EL +LN 
Sbjct: 722  LFPNGRVIELIGNPMPGGGFVMSFTDITAFREAAQALTEANEGLEQRVAERTRELSQLNL 781

Query: 774  QLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAK--EAEVQKLAHHIE 831
             L  A   +E   QSK+RFLAAVSHDLMQPLNAARLF+++LS   +    E ++L HH++
Sbjct: 782  ALTEAKSTAEAAYQSKTRFLAAVSHDLMQPLNAARLFSAALSHQHEGLPEEARQLVHHLD 841

Query: 832  SALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPS 891
            S+L +AEDLI+DLLDISRLE+GKI+     F + ++   L AEF+ALA +QG++F +  S
Sbjct: 842  SSLRSAEDLITDLLDISRLENGKINPERKPFVLNELFDTLGAEFTALAQEQGLKFRVRGS 901

Query: 892  LLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQ 951
             L V SD KLLRRV+QNFLTNAFRY   G V+LGVRR   G++ ++VWD G GI +DKQQ
Sbjct: 902  RLRVDSDIKLLRRVLQNFLTNAFRY-AKGPVLLGVRR-RNGELCLEVWDRGPGIAEDKQQ 959

Query: 952  EIFEEFNR--GGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPM 1009
             IFEEF R    Q R+++GLGLGLAI+ G+  VLGH + +RSWPG+GSVFS++      +
Sbjct: 960  VIFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHTLRVRSWPGRGSVFSVS------V 1013

Query: 1010 PSSLTQTVA---MVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSL 1066
            P + TQ VA   +    G      +VLCVDNE  IL+GM  LL RWGC+V TA +     
Sbjct: 1014 PLASTQAVAPNPVAELNGHLPSGAQVLCVDNEDSILIGMDSLLTRWGCQVWTARNREECE 1073

Query: 1067 KALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSG 1126
            + L     P + L D+ LD+G TG E++   R R+G+   GV+ISAD  P+++  + ++G
Sbjct: 1074 RWLAQGGRPQLALVDFHLDDGETGTELMAWLRTRMGEPIPGVVISADGRPEMIAQVHAAG 1133

Query: 1127 FRFMAKPIKPLKLRALLN 1144
              ++AKP+KP  LRALL+
Sbjct: 1134 LDYLAKPVKPAALRALLS 1151