Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N2E2

 Score =  288 bits (738), Expect = 1e-81
 Identities = 265/1014 (26%), Positives = 450/1014 (44%), Gaps = 122/1014 (12%)

Query: 6   VIPVSLAYLGVLFLIAWYGDRQTRWLANWR-PWIYSLSIAVYCTSWTFYGTVGQASVNPW 64
           ++ +S AYL VLF +AW  +R     A  R P  Y+LS+ VY ++W FYGTVG A    +
Sbjct: 8   MVLISAAYLAVLFGVAWISERGMIPRAIIRHPLTYTLSLGVYASAWAFYGTVGLAYQYGY 67

Query: 65  SFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVLG 124
            FL  Y+     F+    +L  ++ I +   ++SLAD  A R+ +S       T+  ++G
Sbjct: 68  GFLSSYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLFAFRF-RSTWAGALTTIFMLVG 126

Query: 125 ILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEHH 184
           +LP +ALQ++ +   ++I+  + +      +  V+    + + LFT+ FG+RHI   E H
Sbjct: 127 VLPLLALQIQAVADSISILTREPV------QHRVALSFCVLIILFTIFFGSRHIATREKH 180

Query: 185 RGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDG--------LELSTIAASTY---QAPN 233
            G++ AIAFES++KL+A   VG++  Y  +  DG        L+  T  A+ +   Q   
Sbjct: 181 EGLVFAIAFESVIKLIAIGGVGLYALYGVF--DGPQQLEIWLLQNQTALAALHTPLQEGP 238

Query: 234 WPTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTG 293
           W TLL   L+   + + +P  +H    EN  P+ L +A W  P++LLLMSL V  I W G
Sbjct: 239 WRTLL---LVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLMSLAVPLILWAG 295

Query: 294 QGLLPNTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPL 353
             L  +T+P+ F + + + A +  +ALLA++GG SAASG++IV+T+AL+ M  N LV+PL
Sbjct: 296 LKLGASTNPEYFTLGIGIAANSKALALLAYVGGLSAASGLIIVTTLALSGMALNHLVLPL 355

Query: 354 LLRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQ 413
                        +    L   RR LI+ ++   +GFYL+L     L+ +G ++F A  Q
Sbjct: 356 ------YQPPAEGNIYRWLKWTRRALIVAIIMAGYGFYLMLGEGQDLANLGIVAFVATLQ 409

Query: 414 FAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNV-----LLWVIT 468
           F P +   +YW   NR+G   GL  G  +WL+ ++     L G+          +++V+ 
Sbjct: 410 FLPGVLSVLYWPTANRRGFIAGLLAGILVWLVAMLLP---LMGNLQGFYIPLLNMIYVLD 466

Query: 469 PPDWLVALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMS 528
              W +A          + S+  N L +  +SL T AS  E   A A     +   +   
Sbjct: 467 DTSWHMA---------AIASLAANVLMFTLISLFTNASSEEASAAEACAVDNVRRPQRRE 517

Query: 529 LYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLP-NQQASSALIRHTERV--- 584
           L+         +  A++       + A  +     R+  LP +++   AL R  +R+   
Sbjct: 518 LH-----AASPQEFATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEAN 572

Query: 585 LAGVFGASSAKLVLTSALQ----GRKMQLEEVATIVDEASELYDFSRGLL---------- 630
           L+G+ G S A+ ++ + L     G     E++  I     + +    GL           
Sbjct: 573 LSGLMGPSVAQDMVETFLPYKAGGENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYH 632

Query: 631 QGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFP------PGLIQVGRPIADVIRHNAQQ 684
           +  ++ +  G+  + K   ++ WN+   EL            L  +G P   ++     Q
Sbjct: 633 RQTLQELPMGVCSLAKDQEILMWNKAMEELTGIAAQRVVGSRLSTLGEPWKGLL-----Q 687

Query: 685 GLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFR 744
           G      P++H+ ++   L+  T   +    A    +   GN     G V+   D+T   
Sbjct: 688 GFIDL--PDEHLHKQHLALDGQTRWLNLHKAAIDEPL-APGN----SGLVLLVEDLT--- 737

Query: 745 EAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPL 804
                     + LE++++                   SER + S  R  A V+H++  P+
Sbjct: 738 --------DTQMLEDKLV------------------HSERLA-SIGRLAAGVAHEIGNPI 770

Query: 805 NAARLFASSLSEVAK-EAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFA 863
                 A +L E  + + E+ +++  I         ++  L+  +   +G    +     
Sbjct: 771 TGIACLAQNLREEREDDGELTEISGQILEQTKRVSRIVQSLMSFA--HAGGHQHNDEPVC 828

Query: 864 IMDVLSNLNAEFSALAAKQGVQ-FSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKV 922
           + +V  +     +       VQ F+L     WV  DP+ L +V+ N L+NA   +P G  
Sbjct: 829 LAEVAQDAIGLLALNRRNFEVQFFNLCDPDHWVDGDPQRLAQVLINLLSNARDASPAGSA 888

Query: 923 ILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQGLGLGLAIS 976
           +          V + V D G GI Q+    +FE F          GLGL L  S
Sbjct: 889 VRVKSEAFEHTVDLIVEDEGSGIPQNIMDRLFEPFFTTKDPGEGTGLGLALVYS 942