Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 984 a.a., Two-component sensor kinase CbrA from Pseudomonas syringae pv. syringae B728a

 Score =  288 bits (738), Expect = 1e-81
 Identities = 268/1007 (26%), Positives = 446/1007 (44%), Gaps = 114/1007 (11%)

Query: 9   VSLAYLGVLFLIAWYGDRQT--RWLANWRPWIYSLSIAVYCTSWTFYGTVGQASVNPWSF 66
           VS AYL VLF +AW  +     RW+    P  Y+LS+ VY ++W FYGTVG A    + F
Sbjct: 13  VSAAYLLVLFGVAWVSEHGLIPRWIIR-HPLTYTLSLGVYASAWAFYGTVGLAYQYGYGF 71

Query: 67  LPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVLGIL 126
           L  Y+     F+    +L  ++ I +   ++SLAD  A R+ +S       TV  ++G+L
Sbjct: 72  LSSYLGVSGAFLLAPVLLYPILRITRTYQLSSLADLFAFRF-RSTWAGALTTVFMLIGVL 130

Query: 127 PYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEHHRG 186
           P +ALQ++ +   + I+  + +      +  V+      + LFT+ FG+RHI   E H G
Sbjct: 131 PLLALQIQAVADSIGILTREPV------QDRVAVAFCALITLFTIFFGSRHIATREKHEG 184

Query: 187 MMMAIAFESIVKLVAFLCVGVFIAYLAWRTDG--------LELSTIAASTY---QAPNWP 235
           ++ AIAFES++KL+A   VG++  Y  +  DG        L+  T  AS +   Q   W 
Sbjct: 185 LVFAIAFESLIKLIALGGVGLYALYGVF--DGPQQLELWLLQNQTALASLHTPLQEGPWR 242

Query: 236 TLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQG 295
           TLL   L+   + + +P  +H    EN  P+ L +A W  P++LLL+SL V  I W G  
Sbjct: 243 TLL---LVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLISLAVPLILWAGLK 299

Query: 296 LLPNTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLLL 355
           L   TSP+ F + + + A +  +ALLA++GG SAASG++IV+T+AL+ M  N LV+PL  
Sbjct: 300 LGATTSPEYFTLGIGIAANSKSLALLAYIGGLSAASGLIIVTTLALSGMALNHLVLPL-- 357

Query: 356 RRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFA 415
                      +    L   RR LI+ ++   +GFYL+L +   L+ +G ++F A  QF 
Sbjct: 358 ----YQPPAEGNIYRWLKWTRRGLIVAIIALGYGFYLMLGAQQDLANLGIVAFVATLQFL 413

Query: 416 PAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVLLWVITPPDWLVA 475
           P +   +YW   NR+G   GL  G ++W ++++     L G+     + W+    + +  
Sbjct: 414 PGVLSVLYWPTANRRGFIAGLLAGISVWAVSMLLP---LIGNLQGFYIPWL----NMIYV 466

Query: 476 LGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSE--RLQAAAFVGTPLPENENMSLYQSR 533
           L   S     + S+  N L +  +SL T AS  E    +A A      P+   +     +
Sbjct: 467 LDDTSWHMAAIASLAANVLLFTLISLFTNASPEEAGAAEACAVDNVRRPQRRELHAVSPQ 526

Query: 534 VTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLP-NQQASSALIRHTERV---LAGVF 589
               +L         +  V  A        R+  LP +++   AL R  +R+   L+G+ 
Sbjct: 527 EFATQLAKPLGAKAAQKEVEQAL-------RDLYLPFDERRPYALRRLRDRIEANLSGLM 579

Query: 590 GASSAKLVLTSAL---QGRKMQLEEVATIVDEASELY-----------DFSRGLLQGAIE 635
           G S A+ ++ + L    G +  + E    ++   E Y           D  R   +  ++
Sbjct: 580 GPSVAQDMVETFLPYKSGSEKYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYHRQTLQ 639

Query: 636 HIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCG-PGDPED 694
            +  G+  + +   ++ WN+   EL       +   R   + I    +  L G    P++
Sbjct: 640 ELPMGVCSLAEDQEILMWNRAMEELTGIVAQRVVGSR--LETIAEPWKSLLTGFTSLPDE 697

Query: 695 HVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMAN 754
           H+ ++   L+  T   +    A    +   GN     G V+   D+T             
Sbjct: 698 HLHKQKLGLDGQTRWLNLHKAAINEPL-APGN----SGLVVLVEDLT-----------DT 741

Query: 755 ETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSL 814
           + LE++++                   SER + S  R  A V+H++  P+      A +L
Sbjct: 742 QMLEDKLV------------------HSERLA-SIGRLAAGVAHEIGNPITGIACLAQNL 782

Query: 815 SEVAKE-AEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNA 873
            E  +E  E+++++  I         ++  L+  +   +     H HS   + +      
Sbjct: 783 REEREEDGELKEISSQILEQTKRVSRIVQSLMSFAHAGA-----HQHSDEAVCLAVVAQD 837

Query: 874 EFSALAAKQ---GVQF-SLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRV 929
               LA  +    V F +L     W   DP+ L +V+ N L+NA   +P G  +     V
Sbjct: 838 AIGLLALNRRNFEVHFYNLCNPEHWAVGDPQRLAQVLINLLSNARDASPAGSAVRVRSEV 897

Query: 930 ATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQGLGLGLAIS 976
           +   V + V D G GI +     +FE F          GLGL L  S
Sbjct: 898 SEHTVDLIVEDEGSGISKAIMDRLFEPFFTTKDPGEGTGLGLALVYS 944