Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1168 a.a., sensory transduction histidine kinase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  727 bits (1877), Expect = 0.0
 Identities = 439/1172 (37%), Positives = 670/1172 (57%), Gaps = 38/1172 (3%)

Query: 1    MQGWLVIPVSLAYLGVLFLIAWYGDRQTRW---LANWRPWIYSLSIAVYCTSWTFYGTVG 57
            + G ++   + AYL +LF +A YGDR+ R     A  RP +Y+LS+A+YCTSWT++G VG
Sbjct: 2    LSGSVIFASAFAYLLLLFAVASYGDRRARRNEIAAKGRPLVYALSLAIYCTSWTYFGGVG 61

Query: 58   QASVNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAV 117
             A+     F  IYI PILMF  G  ++ R++ +AK E +TS+ADF+AARYGK+  +A  V
Sbjct: 62   LAAERGLEFTGIYIGPILMFTLGMPLIRRIVRLAKTEKLTSVADFVAARYGKNPAVAAIV 121

Query: 118  TVIAVLGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSW--FVVLALALFTMLFGT 175
             +I+++G +PYIALQL+ ++  +  +        G  E+ V     V L LA F ++FGT
Sbjct: 122  ALISLVGAIPYIALQLKAVSSSVATMIDTSDYGIGSGENFVDLPLLVTLFLACFAIVFGT 181

Query: 176  RHIDNTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLA-------WRTDGLELSTIAAST 228
            RH D TEH  G+++AIA ES+VKLVA L VGV+I ++        W      ++ IAA  
Sbjct: 182  RHTDATEHQDGLILAIAMESVVKLVAMLTVGVYIVFVLFGGPANLWAEAQQSVTVIAALE 241

Query: 229  YQAP--NWPTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFV 286
            YQ P   W   ++   L+   I+ LPRQFH  VVEN    +L TA  LFP+YL+ ++ FV
Sbjct: 242  YQTPVARW---ILMIALSAFGIIMLPRQFHVTVVENRTDNELRTAGILFPLYLIAINAFV 298

Query: 287  LPIAWTGQGLLPNT-SPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMV 345
            LPIA  G      + + D ++++LP+      + L  F+GG SAA+ MVIV+++AL+IMV
Sbjct: 299  LPIAIAGILTFSGSGNADLYLLALPLAGDVPLVTLFTFIGGFSAATAMVIVASVALSIMV 358

Query: 346  SNDLVMPLLLRRMRLSQR--THRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAI 403
            SND+VMP+ LRR RL  R       +G L+ IRRT I ++LF  +G+Y   D    L+++
Sbjct: 359  SNDIVMPVFLRR-RLGTRGSLQEDMAGTLLNIRRTAIFVVLFLGYGYYRAADISAGLASL 417

Query: 404  GFLSFSAITQFAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVL 463
            G LSF+AI Q APA+ GG+ WR+ N +G   G+  GF +W   L   +  L G  ++++ 
Sbjct: 418  GLLSFAAIAQMAPALLGGLVWRQANARGAIAGMVSGFLVWAYVLFLPS--LGGPDNSHIA 475

Query: 464  LWVIT--PPDWLVALGLKSADW--GMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGT 519
              V++   P   +  G +S        LS+ +N   YI  SL       ER QA  F+  
Sbjct: 476  STVLSFLLPFTDLFSGAQSDPLVNATALSMLVNVAAYIVGSLTRAPKPLERFQAGVFITR 535

Query: 520  PLPENENMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIR 579
                       +++VTV +L+    R++G  R++ +F  Y  Q    L  N  A  AL+ 
Sbjct: 536  RSRTERTFRGRKTKVTVRDLKTTIGRYMGEERMQRSFHTYEQQSGRWLDDNASADMALVH 595

Query: 580  HTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQ 639
             +E++L    G+SSA+LVL+  LQ       + A ++D+ASE   +++ +L  A+  + Q
Sbjct: 596  FSEQLLGSAIGSSSARLVLSLVLQRMDDTSSDTAWLLDQASEALQYNQDMLHTALSQMDQ 655

Query: 640  GIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRR 699
            GIAV D    L+ WN+R+ EL + P    QVG P+AD++   A++G       +D  +  
Sbjct: 656  GIAVFDNANNLIIWNRRFRELMDLPEAAGQVGFPLADIVAILARRG----DVRKDEEKAL 711

Query: 700  VYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEE 759
            + +           +    R++EV+ N MP  G V ++TDIT    A+ +LK ANETLE 
Sbjct: 712  IANFLTLDKPFLLELAGGARIVEVRSNAMPDKGIVTTYTDITQRVAADMALKQANETLEL 771

Query: 760  RVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAK 819
            RV +RT EL ++N++L  A   +E  +  K+RF AA  HD++QPLNAARL++SSL E   
Sbjct: 772  RVAERTGELTRVNRELGEARAAAEEANIGKTRFFAAAGHDILQPLNAARLYSSSLVERLG 831

Query: 820  EAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALA 879
            +++ + L  +I+S+L + E ++  +LDISRL++G +     S  + ++L  +  +F+ +A
Sbjct: 832  DSDNRALVQNIDSSLESVEAILGAVLDISRLDTGAMKPRLQSVPLDELLRRIETDFAPMA 891

Query: 880  AKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQ-VRIDV 938
              + ++  ++P+ L   SDP LLRR++QN ++NA +Y   GKV++GVRR   GQ   I+V
Sbjct: 892  RAKDIELVIMPTSLAARSDPNLLRRLVQNLVSNAIKYTLRGKVLVGVRR--HGQTATIEV 949

Query: 939  WDNGIGIEQDKQQEIFEEFNRGGQ-VRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGS 997
             D+GIGI   K + IF+EF R  +  R+  GLGLGL+I   I+ VL H + ++S PG+G+
Sbjct: 950  LDSGIGIPSSKFRTIFKEFARLEEGARTASGLGLGLSIVDRISRVLNHPVGLQSKPGKGT 1009

Query: 998  VFSITLDRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVK 1057
             F +T+   +     L        +    L  L V+C+DNEP IL GM  LL  WGC V 
Sbjct: 1010 GFKVTVPLDKSAGGRLKPQSVAAAKTSEALAGLNVICIDNEPKILEGMALLLGGWGCSVT 1069

Query: 1058 TATDIHGSLKALEGQW--IPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRN 1115
            TA  + G  +   G+    PD I++DY L +G TG+E +   R    +    ++++ADR+
Sbjct: 1070 TAESLAGCTEMAPGRLGVRPDAIIADYHLGDG-TGVEAIAAIRGLWQESIPALMVTADRS 1128

Query: 1116 PDILDGIESSGFRFMAKPIKPLKLRALLNSLS 1147
            P++    E  G     KP++P  LRA L  L+
Sbjct: 1129 PEVRGAAERDGVSLQHKPVRPAALRAWLTQLA 1160