Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  289 bits (739), Expect = 7e-82
 Identities = 190/550 (34%), Positives = 283/550 (51%), Gaps = 30/550 (5%)

Query: 618  EASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADV 677
            E   + D    L++  +EH+ QG+ + D+Q RLV WN+   +L   P G  ++G     +
Sbjct: 211  ERERILDDQARLIRATLEHLNQGVCIFDQQARLVGWNRLMGDLLSIPIGRFRIGSRFESI 270

Query: 678  IRHNAQQGLCGPGDPEDHVRRRVY-HLEQGTSHTSSRVRADGR---------------VI 721
                 +       D  D V          G S  S+   AD R               V+
Sbjct: 271  FERLRETFTFAQADIADQVADWARPRTALGDSSASAETAADQRARAPLSFDIQQGATRVL 330

Query: 722  EVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQR 781
             V    MP GGFV+SFTD+T  R+A +++  A +TLE+RVL+RTLELE        A Q 
Sbjct: 331  TVFMQDMPDGGFVISFTDVTAERQAARAMSEARDTLEQRVLERTLELED-------ALQA 383

Query: 782  SERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLI 841
            +ER + SKSRF+AA SHDL+QPL+AA+LF ++L     +A  Q   H   +AL + E L+
Sbjct: 384  AERANASKSRFVAAASHDLLQPLSAAKLFVAALKSELPDASPQNTLHKAANALDSVETLV 443

Query: 842  SDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKL 901
            S LLDISRL+SG+ ++H  S  + D+L  L  E    A  +G+   L PS   V SD   
Sbjct: 444  SALLDISRLDSGRAEVHETSVDLDDLLGQLQDEMRPTADIKGLTLRLRPSRARVLSDVTY 503

Query: 902  LRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNR-G 960
            LRR++QN ++NA RY   G V++G+ R     VR++VWD G GI  + +  IF EF R  
Sbjct: 504  LRRIMQNLISNALRYTDQGGVLIGI-RPRRASVRVEVWDTGPGIADEDRNRIFAEFQRLN 562

Query: 961  GQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDR---AQPMPSSLTQTV 1017
                +  G+GLGLAI +    +LGH +++RS  G+G+VF+I L R     P+    +   
Sbjct: 563  ATASAADGMGLGLAIVERACALLGHPLTLRSEVGRGTVFAIDLPRDAACPPIGEVSSPRA 622

Query: 1018 AMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEV-KTATDIHGSLKALEGQWIPD 1076
               +   ++L  L  L +    D+   +   +E+WG +V   A++        E +  PD
Sbjct: 623  EPPSPAPTQLPQLIALLIVAGADLRQALSLTMEQWGIDVLPCASEDEARTLLAEIEVTPD 682

Query: 1077 VILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKP 1136
            V+L D +L + + G +V++  R   G      +IS+  NPDI    +    +  AKPI  
Sbjct: 683  VLLIDLQLGSNQCGAKVIEDLRRDFGP-LPACLISSSPNPDIPRLAQKLDAQLFAKPINT 741

Query: 1137 LKLRALLNSL 1146
             +LR+ LN L
Sbjct: 742  EQLRSFLNGL 751



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 15/184 (8%)

Query: 596 LVLTSALQGRKMQLEEVATIVD-------EASELYDFSRGLLQGAIEHIGQGIAVVDKQL 648
           ++L   ++ R   LE    +++       EA+   + +R  L  AIE + +G A+ + Q 
Sbjct: 48  VLLEEEIRSRTRDLERTLDLLNLSNAKLAEANRETEAARANLANAIETVQEGFALFNAQD 107

Query: 649 RLVAWNQRY-LEL----FEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHL 703
            LV  N R+ + +     +  PGL         ++  +    L     P     RR+   
Sbjct: 108 VLVMCNSRFGMHMPDIRADLRPGL--RFDSYVQLVSSSTSLSLPAGTPPATWAARRLARH 165

Query: 704 EQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQ 763
           +  +   + R+  + R ++V  +  P GG V+  TD+T     +   +      + R+++
Sbjct: 166 QDRSVMFNVRMTGN-RWVQVSEHRTPDGGTVILQTDVTDIMRLQHQERERILDDQARLIR 224

Query: 764 RTLE 767
            TLE
Sbjct: 225 ATLE 228