Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 892 a.a., two-component system sensor histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  378 bits (971), Expect = e-108
 Identities = 228/646 (35%), Positives = 368/646 (56%), Gaps = 40/646 (6%)

Query: 9   VSLAYLGVLFLIAWYGDRQT------RWLANWRPWIYSLSIAVYCTSWTFYGTVGQASVN 62
           V L+Y+ +LF++A+  DR        RW+ +  P IY+LS+++YCT+WTFYG VG A+ +
Sbjct: 10  VCLSYVALLFIVAFAADRHASHGRPARWMRS--PLIYTLSLSIYCTAWTFYGAVGYAARS 67

Query: 63  PWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAV 122
              ++ IY+ P L+ V  W  L +L+ I + + ITS+AD ++ARYGKS  LA+ VT++AV
Sbjct: 68  GLEYITIYLGPTLVMVGWWWGLRKLVRIGRSQRITSIADLLSARYGKSNLLAIGVTILAV 127

Query: 123 LGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTE 182
           +G  PYI+LQL+ IT+  +I A +   +    E+   ++V   LA F +LFGTR+++  E
Sbjct: 128 IGTTPYISLQLQSITLSFSIFA-EADPLRSVNETQTVFWVAAGLAAFAILFGTRNLNANE 186

Query: 183 HHRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDG--------LELSTIAASTYQAPNW 234
            H G++ A+A E++VKLV+ L VG+F+    W   G        ++ S+I         W
Sbjct: 187 RHHGVVTAVALEAVVKLVSLLAVGIFV---VWGVAGGVGETMARIDASSIGQWQVDGGRW 243

Query: 235 PTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQ 294
            T+   T L+  A VCLPR F  MVVENE  + L  A W FP+YLLL+S+FV+PIA  G 
Sbjct: 244 ATI---TFLSAAAFVCLPRMFQVMVVENEDERHLRVAAWAFPLYLLLISIFVVPIAAIGL 300

Query: 295 GLLP-NTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPL 353
            LLP  ++PD FV++LP+  G   +A+L+FLGG S+A+ M IV+ +AL+ MVSN +VMP+
Sbjct: 301 ELLPVGSNPDLFVLTLPLAEGQQGLAMLSFLGGFSSATSMAIVAAMALSTMVSNHIVMPI 360

Query: 354 LLRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQ 413
            LR   +          ++++ RR  I  ++   + +Y +     +L+AIG +SF+ I+Q
Sbjct: 361 WLRWQEVGASVSGDVRHVVLLSRRLSIAGIMALGYFYYTLSGGGAALAAIGLISFTGISQ 420

Query: 414 FAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVLLWVITPPDWL 473
             P++ GG++WR   R G   GL+VGF +WL T++   ++  G    +VL   +    WL
Sbjct: 421 MLPSLVGGLFWRGATRSGALAGLSVGFAIWLYTML-LPELGGGLLPAHVLADGVLGLSWL 479

Query: 474 ---VALGLKSAD---WGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFV----GTPLPE 523
                 G++  D     +L S+ LNT  ++  SL+T  S  ERLQ A FV     +  P 
Sbjct: 480 RPHALFGIEGLDPTVHAVLWSMALNTAAFLIGSLLTFPSPMERLQGAQFVHVFDHSSGPR 539

Query: 524 NENMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTER 583
               S+ QS     +L +++ R +G    +  F    ++Q     P  + + A +   ER
Sbjct: 540 GWTGSVAQSE----DLMVMSQRILGAGEAQKFFQSELTRQGGR-GPLPEPTPAFLERLER 594

Query: 584 VLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGL 629
            L+   GA++A  ++   + G  + ++++  + DE +++ ++S  L
Sbjct: 595 ELSASIGAAAAHAMVGQIVGGSSVSVQDLLAVADETAQILEYSNRL 640



 Score = 88.2 bits (217), Expect = 3e-21
 Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 16/287 (5%)

Query: 731  GGFVMSFTDI-TVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSK 789
            GG  +S  D+  V  E  Q L+ +N     R+  ++ EL +  ++L    ++  + SQ K
Sbjct: 614  GGSSVSVQDLLAVADETAQILEYSN-----RLETQSEELSRTARKLQETNEKLTQLSQQK 668

Query: 790  SRFLAAVSHDLMQPLNAARLFASSLSEVAKEA--EVQKLAHHIESALGAAEDLISDLLDI 847
              FL+ VSH+L  P+ + R F+  L +    A  +  + A  I         L++DLLD+
Sbjct: 669  DAFLSQVSHELRTPMTSIRAFSEILRDTENLASQDHSRYAGIIHDEAQRLTRLLNDLLDL 728

Query: 848  SRLESGKIDLHPHSFAIMDVLSNLNAEFSALA---AKQGVQFSLVPSLLWVHSDPKLLRR 904
            S LE+G++ L+  +  + DVL   +A  +ALA   A+  V+       + + SD   L +
Sbjct: 729  SVLENGQVSLNISAGRLGDVLD--HAVATALADGSARLRVERDAATDDMRLSSDLDRLAQ 786

Query: 905  VIQNFLTNAFRYNPNGKVILGVRRVATGQ-VRIDVWDNGIGIEQDKQQEIFEEFNRGGQV 963
            V  N + NA +Y       L +    +G  + ID  DNG GI    +  IFE+F+R    
Sbjct: 787  VFINLIANADKYCTAADPQLRITARQSGHWLFIDFIDNGDGIPPAFRTTIFEKFSRVSPE 846

Query: 964  RSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMP 1010
            R+  G GLGLAI + I   LG  ++  S    G  F ++L   Q  P
Sbjct: 847  RAG-GAGLGLAICREIMQRLGGDVAYLSGE-VGGAFQVSLPLRQENP 891