Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  281 bits (720), Expect = 1e-79
 Identities = 190/556 (34%), Positives = 290/556 (52%), Gaps = 51/556 (9%)

Query: 618  EASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADV 677
            E   L D     L    +++G G+     +  ++  N R+ E+   P  L+Q G P++ +
Sbjct: 194  EKEHLIDRQADYLAAVFQNMGSGVCSFSAEGEVMMQNARFREILGVPLTLLQAGTPLSTL 253

Query: 678  IRHNAQQGLCGPGDPEDHVR------RRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGG 731
            +     + L    D   HV       RR   L +  SH S+RV      ++V  N +P G
Sbjct: 254  LDFLRTRALISE-DAWLHVDAWRDELRRKGALVRRVSHGSNRV------LDVHANVLPDG 306

Query: 732  GFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVT-------------- 777
            GF++   D+T+  +         E LE RV  RT EL + N +L                
Sbjct: 307  GFLVELKDVTLETQT-------TELLENRVAARTAELTRANARLTAEYEQKARVEEELRL 359

Query: 778  ATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAA 837
            + +R+E    SK+RFLAA SHDL+QP+NAA+L  S+L E  +E   Q +   ++ A  +A
Sbjct: 360  SKERAEAAVSSKTRFLAAASHDLLQPINAAKLLISTLQEATRETSFQPMVKRLKGAFSSA 419

Query: 838  EDLISDLLDISRLESGKIDLHPHSFAIMDV-----LSNLNAEFSALAAKQGVQFSLVPSL 892
            E+L+  LLDISRLES      P + ++M V     + ++  + S LAA++GV+ ++VP  
Sbjct: 420  ENLLHSLLDISRLESAD----PEAVSLMAVDLGALMESVRDDQSPLAARKGVRLTVVPCS 475

Query: 893  LWVHSDPKLLRRVIQNFLTNAFRYN-PNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQ 951
            L+V SDP  L R IQN + NA +Y  P G+V++G RR   G V ++VWD G+GI +  Q 
Sbjct: 476  LFVRSDPVYLMRSIQNLVVNAVQYTEPGGRVLVGGRRKG-GHVVLEVWDTGVGIAKKDQA 534

Query: 952  EIFEEFNRGGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPS 1011
             IFEEF RG  V+   G+GLGL+I      +LGH +S+RS PG GSVF + +     +P 
Sbjct: 535  RIFEEFTRGDDVQLGSGVGLGLSIVDRACRLLGHELSVRSKPGCGSVFRMKIALVDGVPI 594

Query: 1012 SLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEG 1071
                  A  ++ G  + H+ V+ ++N+ D+L G    LE+WG  V  A     +L  +  
Sbjct: 595  RRKTQSAAADDGGQPIDHI-VMVIENDEDVLYGTTQWLEQWGASVLAARSTEEALAHVND 653

Query: 1072 QWI-PDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILD--GIESSGFR 1128
              I PD+IL+DY+LD   TG+  +   R   G     ++I+ADR+ D++   GIE+    
Sbjct: 654  MGIPPDIILADYQLDGPDTGISAISAIRSLTGSDVPAIMITADRS-DLVRRLGIEND-LT 711

Query: 1129 FMAKPIKPLKLRALLN 1144
             M KP    +LR L++
Sbjct: 712  VMTKPAALSRLRPLID 727