Pairwise Alignments

Query, 396 a.a., 3-phenylpropionate MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score =  121 bits (303), Expect = 4e-32
 Identities = 106/379 (27%), Positives = 177/379 (46%), Gaps = 15/379 (3%)

Query: 9   WISQYFIGFFFAYGVYLPFWSLWFEDQGVSATDIGVLVGIGFATRCVANLVLTPRLHRVE 68
           WIS  +  FF   GV +P+  ++FE++G  A  IG L+ I  ATR +A  +      +  
Sbjct: 27  WISACYFFFFAILGVLVPYLGVFFENRGFDAQQIGFLLAILMATRIIAPNIWAMVADKTG 86

Query: 69  QLMPALRWLSFAAMLFVGFHFFTGGSFWLMALATVLFNLCCGPVVPISDAMANYYAKLKM 128
                ++ +  A        FF  G F  +A++  ++      ++   + +         
Sbjct: 87  MRGQLVK-MGAACSAVTFMSFFYHGGFVYLAISLSIYTFFWNAILAQLEVITLETLGENT 145

Query: 129 LDYGRTRLWGSIAFIAGSTVVGFLVAKWGSLMILYTALVGVAVSW-LLSLRQITPMPVTE 187
             YG+ R +GS+ ++     VGF ++++G+ ++ +   VG+A+   LL      P    +
Sbjct: 146 GGYGKIRSFGSLGYLVFVVSVGFAISQFGTEILPF---VGLALFLGLLGCSLSLPSTRVK 202

Query: 188 HEAHAVRPKLKELLTEWPVVKFLLLVALIQGSHAAYYSFGSIYWKQAGHSEDIIGYLWSL 247
            +   V   LK    +  ++ FLL   L+Q S   +Y F  +Y KQ G+SE   G   +L
Sbjct: 203 VDKSQVPTPLK---LDAGIIWFLLSAMLLQMSAGPFYGFFVLYLKQVGYSESSAGIYVAL 259

Query: 248 GVVAEVLVFAFSKRWFAGWSLRTLFFVASLGVIA-RWGLTASTTTILALVAI-QLLHGVT 305
           GV+AE+++F F+ R    + +  L  V S+G  A RW L A   + +  + + QLLH  T
Sbjct: 260 GVLAEIVMFMFAPRLLGRYGVSAL-LVLSIGFTAVRWLLMAFCASNMVWLGVSQLLHAFT 318

Query: 306 FAIAHIAAIQYI-QHAPQNKMVALQALYNAIPLGAVIAAVTTLSG--WGYEHWGAAVFWA 362
           F + H A+IQ++ Q          QALY ++  G   A  T L G  WG +   A + W 
Sbjct: 319 FGLVHAASIQFVHQRFDVRHRSKGQALYASLSFGVGGALGTWLCGFIWG-DGSQAWLSWL 377

Query: 363 MAAMGGLALLIRVDTPPST 381
            AA+  L  ++ V   P T
Sbjct: 378 AAAVCALLSMLAVLLIPKT 396