Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas fluorescens FW300-N2E2

 Score =  184 bits (466), Expect = 1e-50
 Identities = 156/640 (24%), Positives = 279/640 (43%), Gaps = 57/640 (8%)

Query: 4   KFNMQSPPFNRL-TAEQQHQLRSALDVAYFRQRDVLIDAQHPVTHLHILIKGTVEERSPD 62
           +F  + PPFN++  A   + +   L   Y     ++  A  PV H +I+ +G V    P 
Sbjct: 26  QFLQRFPPFNQMENAHLAYLVEQCLLRFYAPGETIIKPADGPVEHFYIVKQGRVVGERPH 85

Query: 63  ----GKEVFAHYANDDLFDVRAMF-EELSKHQYMALEDTLSYLLPKSIFLQLYEQNGEFA 117
               G E        + F + A+  E  ++ ++ A EDT    L K  F++L+  +G F 
Sbjct: 86  TAKGGTETTFEITTGECFPLAALLGERATRTEHRAGEDTFCLQLNKLAFIKLFALSGPFR 145

Query: 118 AYFDNNLAKRQELIEAAAQQKNIAEF-----ILTKVDRSIYHPPFILSPEQPIHSVTQQL 172
            +    ++   + +    QQK+         + T++       P   SP+ P+    + +
Sbjct: 146 DFALRGVSSLLDQVNQQVQQKSAQTLGTQYSLNTRLGELAMRHPVSCSPDTPLREAVKLM 205

Query: 173 KERGIDAALVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLH 232
            ++ + + +V          +    P  I T  + L  V+ +G       G+ +   V H
Sbjct: 206 HDQQVGSIVV---------VNEQKAPVGIFTLRD-LRQVVADG------AGDFSQAIVGH 249

Query: 233 VDEGDFL-------FNAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLA 285
           + +  F        F+A + MT + I  V +    +  G++S   + S        L   
Sbjct: 250 MTQAPFFLSPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVDLVHLART 309

Query: 286 IARAASIDELALAANKQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFELVV-----P 340
           I  A  ++ L     +  +LVE +++ G  +  +  +I  +N+  + +  EL +     P
Sbjct: 310 IRNAPKVENLVALRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLLDKGDP 369

Query: 341 PALHDQCCLVVLGSEGRGEQILKTDQDNALIIQDGLEWHQCQ------PIMETLTHTLLQ 394
                  C    GSEGR EQ L TDQDN ++ +     H  Q      PI + +  +L  
Sbjct: 370 GVPFSWLCF---GSEGRREQTLHTDQDNGILFEARDAAHAAQIRGLLLPIAQQINQSLAL 426

Query: 395 LGYPLCPGKVMVNNPKWVRSQSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLA 454
            G+ LC G +M  NP+   S+++W R  + +++ A PE ++  +I+ D   V G+     
Sbjct: 427 CGFTLCKGNIMAGNPELCLSRAEWARRFSAFIREATPENLLGSSIYFDLRVVWGDEQGCE 486

Query: 455 PVKAHLQHLMAGQELILAEFTRPALNFSVPLTLFGN-VKSSKQG----IDIKQGGIFPIV 509
            ++  +   +A   L        AL    P+  F + V S K G    +D+K  G+ P V
Sbjct: 487 QLRRQILDQVADNRLFQRMMAENALRHRPPVGRFRDFVLSRKNGEKATLDLKVQGLTPFV 546

Query: 510 HGVRALSLEHAIDANNTFDRIEALVKKRVLEQETGDNLSEAFKLFLKLRLAQ-QLGNQHS 568
            G R L+L + I+ANNT +R+  LV K+V+E   G    EA+    + R+ Q QL  + +
Sbjct: 547 DGARLLALANGIEANNTLERLRQLVDKQVIEPLDGAAYEEAYHFIQQTRMQQHQLQTREN 606

Query: 569 ---TNQLDFKQLDRTERDLLRHSLHVVKKFKQWLGYHYQI 605
              +N++D   L+  +R +LR SL   ++ +  L   YQ+
Sbjct: 607 LPYSNRVDPDSLNHLDRRILRESLRQAQRLQSSLTLRYQL 646