Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., CBS domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  172 bits (437), Expect = 3e-47
 Identities = 158/611 (25%), Positives = 265/611 (43%), Gaps = 43/611 (7%)

Query: 4   KFNMQSPPFNRLTAEQQHQLRSALDVAYFRQR--DVLIDAQHPVTHLHILIKGTVEERSP 61
           +F  Q  PF+ L+          L VAY+ +    V +D  HP   L+I+  G  E R  
Sbjct: 14  QFLRQLVPFDSLSDASLLACVRHLSVAYYSKSMGHVPLDESHP--RLYIVRSGAFEVRDE 71

Query: 62  DGKEVFAHYANDDLFDVRAMFE-ELSKHQYMALEDTLSYLLPKSIFLQLYEQNGEFAAYF 120
           +G E+       D F   ++   E   ++   LED L Y L   +F  L +++ EF  +F
Sbjct: 72  EG-ELVDRLGEGDFFGFPSLLSGEAISNKVAILEDGLVYQLSPDMFNSLRQESREFDRFF 130

Query: 121 DNNLAKRQELIEAAAQQKNIAEFILTKVDRSIYHPPFILSPEQPIHSVTQQLKERGIDAA 180
           +   AKR   +    + K       +++   +   P  +     I      +++  + + 
Sbjct: 131 NRAFAKR---LRHQGRFKAKELTTTSRISSLMTGSPLTIDCNHSIRQAAVMMRDARVSSL 187

Query: 181 LVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLHVDEGDFLF 240
           LV           +H     I+T  ++ + V+ EG     PV +  T   + +  G  +F
Sbjct: 188 LVT----------DHHKLCGILTDRDLRNRVLAEGFDGTLPVHQAMTRNPVTIGAGALVF 237

Query: 241 NAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASIDELALAAN 300
            AM+ M+ + I  + V  G+  VG++S   IL +  +   +L   I R   +  L   + 
Sbjct: 238 EAMLAMSERNIHHLPVLEGDTPVGVISSTDILRSQGSQPLMLIGEIERQKDVASLISVSK 297

Query: 301 KQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFEL------VVPPALHDQCCLVVLGS 354
           K  EL++SL+S   R   +  ++ +V + +  +   L        P A     C +  GS
Sbjct: 298 KIPELLQSLISADARAEEIGRVLTSVTDALTRRLILLNQQILGQAPMAF----CWLAFGS 353

Query: 355 EGRGEQILKTDQDNALIIQDGLEWHQC---QPIMETLTHTLLQLGYPLCPGKVMVNNPKW 411
           +GR +Q   +DQDN L++    + H     + +   +   L + GY  CPG +M  NPKW
Sbjct: 354 QGRQDQAACSDQDNGLLLAGEPDEHAAGYFEALSRAVCSGLDECGYRFCPGDIMAQNPKW 413

Query: 412 VRSQSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQHLMAGQELIL 471
             S + W++   +WVKA  P+ +M  +IF D   V G ++L   ++  +       ++ L
Sbjct: 414 RMSLARWQQVFDNWVKAPEPKALMHASIFFDMRPVFGPQSLFDALQDKVLAGTRDNDIFL 473

Query: 472 AEFTRPALNFSVPLTLFGNV-----KSSKQGIDIKQGGIFPIVHGVRALSLEHAIDANNT 526
           A     +L  + PL  F         S  +GID+K  G   I    R  +L   I   NT
Sbjct: 474 AGMAGNSLTEAPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNT 533

Query: 527 FDRIEALVKKRVLEQETGDNLSEAFKLFLKLRLAQQLGNQHS-----TNQLDFKQLDRTE 581
             RI AL++  V+ ++   NL++A +    +RLA Q G QH      +N L  +QL    
Sbjct: 534 AKRIRALMELGVIGRKDALNLADAHEFIAHMRLANQ-GVQHRQGQEISNYLKPQQLSSLV 592

Query: 582 RDLLRHSLHVV 592
           R  LR +  VV
Sbjct: 593 RHQLRDAFKVV 603