Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 3e-19
 Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 6/184 (3%)

Query: 26  RHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHR 85
           R   +V LD ETT L+  + ++++I A  I D  I  SQ FE  L   +     SV IH 
Sbjct: 25  REQRWVVLDLETTGLNLNKDQVLSIGAVVIEDGAIDFSQQFERTLQCDKQKLGPSVLIHG 84

Query: 86  IRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVS 145
           +    +  G    EALL  +EF+G+ PL+ +H  +D  +L  A + +LG+ L +  ++V+
Sbjct: 85  LAPSAIAAGSDPAEALLAFMEFVGDSPLLAFHAPFDSHMLGRALKDYLGYRLQHSFLDVA 144

Query: 146 QIYHDKLEKHLPNAYFDLS-LEAICRHLDLPLQDKHDALQDAIAAA-LVFVRLTKGDLPQ 203
               D      P A    S L+       L + D+H+A  DA+A A L  +  ++    Q
Sbjct: 145 ----DLAPMLCPQANLRKSGLDEWIDWFKLQVFDRHNASADALATAELALILFSRARQQQ 200

Query: 204 FIAP 207
            ++P
Sbjct: 201 ILSP 204