Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 6/166 (3%)

Query: 26  RHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHR 85
           R    V LD ETT L  KR  ++ I A  I D  I  SQ FE  LC    +   SV IH 
Sbjct: 36  RQQRLVVLDLETTGLHLKRDLVIAIGAVVIEDGAIDYSQQFECTLCRQVKVTE-SVLIHG 94

Query: 86  IRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVS 145
           I   +L +GL   EALL  +EF     ++ +H  +D+ +L  A ++ LG+ + +  ++V+
Sbjct: 95  IAPSELANGLPPAEALLSFMEFAAGSVILAFHAPFDQRMLGRALKRELGYTMDHTFLDVA 154

Query: 146 QIYHDKLEKHLPNAYFDL-SLEAICRHLDLPLQDKHDALQDAIAAA 190
               D      P A      L+    + ++ +  +H+A  DA+A A
Sbjct: 155 ----DLAPMLFPEAMIHRGGLDHWLDYFNIHIPQRHNASADAMATA 196