Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 63.2 bits (152), Expect = 4e-15
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 2/161 (1%)

Query: 31  VSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQD 90
           ++LD E T LDP R +++ I    I D  II  Q  E  L   Q     S  IH I  ++
Sbjct: 44  LALDLEMTGLDPGRDQILAIGVVPI-DGGIIQLQGAESVLVEIQGSVGQSAVIHGITDRE 102

Query: 91  LHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYHD 150
           LH+ L   +A+  L++ +  R LV +H   D   +     + LG  +P   I+   +   
Sbjct: 103 LHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALERQ 162

Query: 151 KLEK-HLPNAYFDLSLEAICRHLDLPLQDKHDALQDAIAAA 190
           +L + H       L L A  +   LP+ D H+AL DA++ A
Sbjct: 163 RLLRIHDAIQEGSLRLGASRQRYGLPVYDAHNALTDALSCA 203