Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., DNA polymerase III, epsilon subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 11/176 (6%)

Query: 31  VSLDCETTSLDPKRAE-LVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQ 89
           + LD ETT LDP   + LV I   +++ N + +     + +   + +   + R+H +   
Sbjct: 4   IVLDTETTGLDPATGDRLVEIGCIELI-NHMPSGNDLHLYVNPERDMPPEAFRVHGLSEA 62

Query: 90  DLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLP-NRLIEVSQIY 148
            L D     E + + + FIG   L+ ++  +D   L+    +    PLP +R ++  ++ 
Sbjct: 63  FLADKPLFAEVVDEFLAFIGEDRLIIHNAAFDMKFLNAELARLKRPPLPMSRALDTLRM- 121

Query: 149 HDKLEKHLPNAYFDLSLEAICRH--LDLPLQDKHDALQDAIAAALVFVRLTKGDLP 202
               +   P A    SL+A+CR   +D   + KH AL D +  A V++ L  G  P
Sbjct: 122 ---AQARFPGA--QASLDALCRRFGVDTSSRTKHGALIDCVLLAEVYLELIGGREP 172