Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA polymerase III subunit epsilon (RefSeq) from Shewanella loihica PV-4

 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 29  EYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRH 88
           E +++D ETT L+  + ++V+I        RI  ++     +   + L   SV IH I H
Sbjct: 48  ELLAMDFETTGLNVDKDDIVSIGTVPFTLRRIFLNRAQHWTVRPREQLAEESVIIHGITH 107

Query: 89  QDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIAC--RKHLG--FPLPNRLI-- 142
            D+ D         Q++E +  + +V ++   ++  L+ A   R H G  FPL + +   
Sbjct: 108 SDILDAPDLSAIFEQVLEQMAGKIMVVHYQAIERLFLERALIRRIHQGIEFPLIDTMALE 167

Query: 143 -EVSQIYHDKLEKHLP-NAYFDLSLEAICRHLDLPLQDKHDALQDAIAAA 190
            E+ +  H  L + L  +    + L        LP    H+AL DAIA A
Sbjct: 168 SEIQKRQHGGLLQRLKGDKPGSVRLGQSRSRYGLPSYPPHNALTDAIATA 217