Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., DNA polymerase III, epsilon subunit, Proteobacterial from Sphingomonas koreensis DSMZ 15582

 Score = 48.9 bits (115), Expect = 7e-11
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 9/172 (5%)

Query: 31  VSLDCETTSLDPKRAE-LVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQ 89
           +  D ETT L       LV I   ++V NR+ T + F   L   + +   +  +H +   
Sbjct: 4   IVFDTETTGLSFNAGHRLVEIGCVELV-NRVPTGRSFHRYLNPDRDMPVEAFAVHGLSEA 62

Query: 90  DLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYH 149
            L D     E   +LIEF+G+ PL+ ++  +D   ++      LG      L++V +I  
Sbjct: 63  FLADKPRFPEVCDELIEFLGDCPLIAHNAMFDFGFIN----GELG-ACGRPLLQVERIVD 117

Query: 150 DKLEKHLPNAYFDLSLEAICRH--LDLPLQDKHDALQDAIAAALVFVRLTKG 199
                   +     +L+A+C    +DL  ++ H AL DA   A VF+ LT G
Sbjct: 118 TLTMARAKHPGAKHTLDALCVRYGIDLSARELHGALLDAQLLAQVFIELTGG 169