Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)

Query: 29  EYVSLDCETTSLDPKRA-ELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIR 87
           +YV  D ETT L P+R  E+  IAA ++V+ +++ ++ F+  +   + +   +  IH I 
Sbjct: 290 KYVIFDTETTGLLPERGDEVCQIAACRVVNGKMVKTEMFDTLVNPGRPIPLSATNIHGIT 349

Query: 88  HQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIE---V 144
              + D      A      F     L+ ++  +D        +  +G    + +++   +
Sbjct: 350 DAMVADAPDFLTAGRAFHGFADGAVLIAHNAPFDMAFF-YRKQAEIGARFDHPVLDTVLL 408

Query: 145 SQIYHDKLEKHLPNAYFDLSLEAICRHLD--LPLQDKHDALQDAIAAALVFVRLTKGDLP 202
           S + + + E+H        SL+A+   L+  +P + +H AL DA+A   VF++L    LP
Sbjct: 409 SAVIYGQTEQH--------SLDALAERLNVTIPEEARHTALGDALATTEVFLKL----LP 456

Query: 203 QFIAPGV 209
              A G+
Sbjct: 457 MLQAKGI 463