Pairwise Alignments

Query, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella sp. ANA-3

 Score = 42.7 bits (99), Expect = 5e-09
 Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 10/163 (6%)

Query: 31  VSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQD 90
           +++D E T L+P + ++++I    I +N  I     + +L   Q     S  IH I    
Sbjct: 43  IAMDLEMTGLNPLQDQILSIGLVPI-ENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNH 101

Query: 91  LHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTIL--DIACRKHLGFPLP---NRLIEVS 145
           L + ++ +EA+   +       LV +H   D   L  DI    H    LP     L+E  
Sbjct: 102 LTEAVTIEEAMAWFVAQTRGHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEK- 160

Query: 146 QIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKHDALQDAIA 188
              H  L +H       L L A      LP+   H AL DA+A
Sbjct: 161 ---HRLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALA 200