Pairwise Alignments

Query, 649 a.a., acetyl-coenzyme A synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  412 bits (1060), Expect = e-119
 Identities = 239/629 (37%), Positives = 343/629 (54%), Gaps = 20/629 (3%)

Query: 22  DTYLAMYQQSIKDPEGFWSEHGKIVDWIKPFTKVKHTSFDPGHIDIRWFEDGTLNVSANC 81
           + Y   YQ+SI D EGFW +  + + W KP+ +V   S  P +   RWF  G LN   N 
Sbjct: 3   NAYEEAYQRSITDKEGFWGDAARDIVWTKPWDRVLDESQAPLY---RWFAGGELNTCYNA 59

Query: 82  IDRHLAT-RGDQVAIIWEGDDPTQDKTLTYKQLHQEVCRFANALKEQGVRKGDVVCIYMP 140
           +DRH+   RGDQ AII++       +T++YK L  +V  FA  L  +GV KGD V +YMP
Sbjct: 60  VDRHVDEGRGDQAAIIYDSAITGAKRTISYKTLKDQVAGFAGVLASRGVGKGDRVILYMP 119

Query: 141 MVPEAAVAMLACTRIGAVHTIVFGGFSPEALAGRIIDSNAKLVITADEGVRGGRAVPLKK 200
           M+PE+ VAMLAC R+GA+H++VFGGF+P  LA RI D+  K ++ A  G+   R +  K 
Sbjct: 120 MIPESLVAMLACARLGAIHSVVFGGFAPNELATRINDAQPKAIVAASCGIEPNRVIAYKP 179

Query: 201 NVDEALCNPEVKNISKVMVLKRTGGNVAWHEHRDIWWHEATAKAS-DNCPPEEMKAEDPL 259
            VDEA+          V+V +R           DI W  A    +  +C P  + A DPL
Sbjct: 180 LVDEAI-RLSAHKPDSVIVWQREEARADLSNPGDIDWALALETTTPHDCVP--VAATDPL 236

Query: 260 FILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPNEVFWCTADVGWITGHSYLVYG 319
           +ILYTSG+TG+PKGV+   GG+ V    T K +++  P +VFW  +DVGW+ GHSY+ Y 
Sbjct: 237 YILYTSGTTGQPKGVVRDNGGHAVALRWTMKAIYNMSPGDVFWAASDVGWVVGHSYICYA 296

Query: 320 PLANGAKTILFEGVP-NYPTTARMSEVVDKHKVNILYTAPTAIRALMAKGDEAIKGTSRD 378
           PL  GA T++FEG P   P       V+ +HKV  L+TAPTA RA+  +  + ++    D
Sbjct: 297 PLLLGATTLVFEGKPVGTPDAGTFWRVIAEHKVATLFTAPTAFRAIKREDPDGLEIGKYD 356

Query: 379 --SLRIMGSVGEPINPEAWEWYYRTIGNEKSPIVDTWWQTETGGILITPLPG--ATALKP 434
             SLR +   GE  +P   +W    +G    P++D WWQTETG  +     G     +K 
Sbjct: 357 LSSLRALFLAGERCDPATIDWAEHKLG---VPVIDHWWQTETGWAIAANCLGLHLYPVKH 413

Query: 435 GSATRPFFGVQPALVDNMGEIVEGATEGNLVL-LDSWPGQMRTVYGDHDRFEQTYFSTFK 493
           GS T    G    ++D+    V     G LV  L   PG + T++    RF Q Y + F 
Sbjct: 414 GSPTLAAPGWDVRVLDDTNHEVNPGQIGALVCKLPLPPGTLTTLWNAEARFRQAYLADFP 473

Query: 494 GMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFNKIAEAAVVGVPHD 553
           G Y +GD    D++GY ++  R DD++NV+GHR+ T  +E  L     +AE AV+G+  D
Sbjct: 474 GYYKSGDAGFIDDEGYIYVMTRTDDIINVAGHRLSTGAMEEVLAGHPAVAECAVIGISDD 533

Query: 554 IKGQAIYAYITLNDGVYPS-AELHKEVKDWVRKEIGAIATPDVLHWTDALPKTRSGKIMR 612
           +KGQ    ++ L  G+    A++ KE    VR +IG +A          LPKTRSGKI+R
Sbjct: 534 LKGQVPLGFVCLKAGITTEPAQIAKECAALVRDQIGPVAAYKQTVVVPRLPKTRSGKILR 593

Query: 613 RILRKIATGDTSNLGDTSTLADPSVVDRL 641
             ++KIA  +   +   +T+ DP ++  +
Sbjct: 594 GTMQKIADNEAFKM--PATIDDPGILPEI 620