Pairwise Alignments

Query, 649 a.a., acetyl-coenzyme A synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  430 bits (1105), Expect = e-124
 Identities = 246/626 (39%), Positives = 351/626 (56%), Gaps = 18/626 (2%)

Query: 22  DTYLAMYQQSIKDPEGFWSEHGKIVDWIKPFTKVKHTSFDPGHIDIRWFEDGTLNVSANC 81
           D +  ++Q+SI +P  FW E    + W K F +V   S  P +   RWF  G LN   N 
Sbjct: 31  DLHNQLHQESIDNPNAFWGEAAGALAWDKTFERVLDDSQAPMY---RWFSGGQLNTCYNA 87

Query: 82  IDRHL-ATRGDQVAIIWEGDDPTQDKTLTYKQLHQEVCRFANALKEQGVRKGDVVCIYMP 140
           +DRH+ A RG+QVAI +       +  +TY +L  +V R A  +  QGV KGD V IYMP
Sbjct: 88  VDRHVEAGRGEQVAIQYVSPITGTEYGITYNELQAQVSRLAGYMASQGVVKGDRVIIYMP 147

Query: 141 MVPEAAVAMLACTRIGAVHTIVFGGFSPEALAGRIIDSNAKLVITADEGVRGGRAVPLKK 200
           MVPE A AMLAC R+GA+H++VFGGF+   LA RI D+  K++++A  GV     V  K 
Sbjct: 148 MVPETAYAMLACARLGAIHSVVFGGFAANELATRIDDATPKMILSASCGVEPSGVVAYKP 207

Query: 201 NVDEALCNPEVKNISKVMVLKRTGGNVAWHEHRDIWWHEATAKASDNCPPEEMKAEDPLF 260
            +D+AL     K + + ++L R        + RD+ W  A A A  N   + ++A DPL+
Sbjct: 208 LLDDALEQASHK-VEQCVILNRPQLQADLVDGRDVDWQGAMADAP-NIECQTVEATDPLY 265

Query: 261 ILYTSGSTGKPKGVLHTTGGYLVYATMTFKYVFDYQPNEVFWCTADVGWITGHSYLVYGP 320
           ILYTSG+TG+PKGV+   GG+ V    + K+++D  P +VFW  +DVGW+ GHSY+VYGP
Sbjct: 266 ILYTSGTTGQPKGVVRDNGGHAVALAWSMKHIYDIDPGDVFWAASDVGWVVGHSYIVYGP 325

Query: 321 LANGAKTILFEGVP-NYPTTARMSEVVDKHKVNILYTAPTAIRALMAKGDEA--IKGTSR 377
           L  GA T+LFEG P   P        + K+ V   +TAPTAIRA+     E   +K    
Sbjct: 326 LLVGATTVLFEGKPVGTPDPGIFWRTIAKYNVKSFFTAPTAIRAIKRDDPEGDYLKDVDL 385

Query: 378 DSLRIMGSVGEPINPEAWEWYYRTIGNEKSPIVDTWWQTETGGILITPLPGA--TALKPG 435
             L  +   GE  +P+   W  + +     P++D WWQTETG  +   L G     +K G
Sbjct: 386 SCLGTLFLAGERCDPDTLHWAEQQL---DKPVIDHWWQTETGWPVAANLMGTAPVPVKAG 442

Query: 436 SATRPFFGVQPALVDNMGEIVEGATEGNLVL-LDSWPGQMRTVYGDHDRFEQTYFSTFKG 494
           S  +   G    ++D MG++V     GN+V+ L   PG + T++ +  R++++Y S + G
Sbjct: 443 SPAKAVPGYDVQVLDEMGDVVAPDQSGNVVIKLPLPPGTLATLWQNEGRYKESYLSMYPG 502

Query: 495 MYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFNKIAEAAVVGVPHDI 554
            Y TGD    DEDGY +I  R+DD++NV+GHR+ T   E  L     +AEAAV+GV   +
Sbjct: 503 YYLTGDAGYMDEDGYLYIMSRIDDIINVAGHRLSTGRFEEVLCQHEAVAEAAVIGVDDKL 562

Query: 555 KGQAIYAYITLNDGVYPSAE-LHKEVKDWVRKEIGAIATPDVLHWTDALPKTRSGKIMRR 613
           KGQ     + L  G   S E L+KE+   VR++IG +A   ++     LPKTRSGKI+R 
Sbjct: 563 KGQVPLGLVVLKKGCDLSDEQLYKELIALVREQIGPVAAFKLVSAVPKLPKTRSGKILRG 622

Query: 614 ILRKIATGDTSNLGDTSTLADPSVVD 639
            +RKIA  D       +T+ DP  ++
Sbjct: 623 TMRKIA--DNQEFKMPATIEDPYTLE 646