Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., tRNA-dihydrouridine synthase C (EC 1.-.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  128 bits (322), Expect = 2e-34
 Identities = 83/236 (35%), Positives = 130/236 (55%), Gaps = 12/236 (5%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRS-- 77
           + +APM G+ D   R++  R G     V+E +  N  L   A   +++  E  +G ++  
Sbjct: 3   IALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYF-HKLAPELLTGAQTAA 61

Query: 78  -----VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132
                VQ+ GSDP  +AE A  + E G+Q+ID+N GCPAK VNK   G+ LL+ P+++  
Sbjct: 62  GVPLRVQLLGSDPVCLAENAALACELGSQVIDLNFGCPAKTVNKSRGGAVLLKEPELLNQ 121

Query: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEA 190
           I++ V  AV  ++PVT K R G+D+ +   +    LAE  G   + +H RT+   YK  A
Sbjct: 122 IVEHVRRAVPRHIPVTAKMRLGFDSPDGALVCATALAEG-GAAHIVVHARTKVDGYKPPA 180

Query: 191 EYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEI 246
            ++ I  V+  V +PV ANGDI S +  R   E +G + +M+GR    RP + ++I
Sbjct: 181 HWEWIPRVQEVVKVPVFANGDIWSVDDWRRCREISGVEDIMLGRGLVSRPDLARQI 236