Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

 Score =  373 bits (957), Expect = e-108
 Identities = 188/317 (59%), Positives = 235/317 (74%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69
           ++IG Y L N LI+APMAGVTD+PFR+LC R+GA + VSEM++ +  LW + KS+ RM H
Sbjct: 4   VRIGPYTLTNPLILAPMAGVTDQPFRQLCRRFGAALVVSEMLTSDMRLWNSRKSRLRMPH 63

Query: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129
             E   RSVQIAG DPQ++A+AA+ +VE GAQIIDINMGCPAKKV  K AGSAL+R   +
Sbjct: 64  ADEPEPRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERL 123

Query: 130 IEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE 189
           + +IL AVV AV+VPVTLK RTGWD  NKN L++A++AE  GI ALA+HGRTRA +Y GE
Sbjct: 124 VGEILDAVVGAVDVPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRADLYTGE 183

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
           AEYD+I A+K AVSIPV ANGDIDSP+KA  VL  TG D L+IGR AQGRPWIF+E++H+
Sbjct: 184 AEYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREVEHY 243

Query: 250 LEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTF 309
           L  G  +    + E++D +L HV ALH+FYGE +G RIARKHV WYL     A  FR  F
Sbjct: 244 LRTGELLAAPTLEEIEDTLLEHVQALHEFYGEVMGVRIARKHVGWYLATLPGARDFRARF 303

Query: 310 NAIETADQQLDALEGYF 326
           N +E  D Q  ++  +F
Sbjct: 304 NHLEDRDAQGFSIRQFF 320