Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., tRNA dihydrouridine synthase A from Pseudomonas stutzeri RCH2

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 30/324 (9%)

Query: 23  VAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIA 81
           VAPM   TDR  R    +     +  +EM++    L   A  Q  + H+      ++Q+ 
Sbjct: 20  VAPMMDWTDRHCRYFLRQLSRHALLYTEMVTTGALLHGDA--QRFLRHDESEHPLALQLG 77

Query: 82  GSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAV 141
           GS P  +A  A+ +   G   +++N+GCP+ +V   + G+ L+ +P ++ D +KA+ +AV
Sbjct: 78  GSVPAELAACAKLAEAAGYDEVNLNVGCPSDRVQNNMIGACLMGHPQLVADCVKAMRDAV 137

Query: 142 NVPVTLKTR---TGWDTDNKNCLSIAQLAEDCGIQALALHGR---TRACMYKGEAEYDSI 195
            V VT+K R    G D+  + C  + Q+  D G ++  +H R         K   E   +
Sbjct: 138 GVEVTVKHRIGINGRDSYAELCDFVGQV-RDAGCRSFTVHARIAILEGLSPKQNREVPPL 196

Query: 196 KAVKAA------VSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
           +   AA        + +I NG I + ++ R  L+    D +M+GR A   P++   + H 
Sbjct: 197 RYDIAAQLKQDFPDLEIILNGGIKTLDECRAHLQ--TFDGVMLGREAYHNPYLLARVDHE 254

Query: 250 LEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFR--- 306
           L  G+  P +  ++    M  ++    Q   E        +HV    Q    A  FR   
Sbjct: 255 L-FGSDTPVIGRAQALRNMRPYI---EQHLAEGGAMHHITRHVLGLGQGFPGARRFRQLL 310

Query: 307 -----RTFNAIETADQQLDALEGY 325
                +T   +   DQ +  LEG+
Sbjct: 311 SVDIHKTSQPLALLDQAVTLLEGH 334