Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 from Synechococcus elongatus PCC 7942

 Score =  193 bits (490), Expect = 6e-54
 Identities = 124/326 (38%), Positives = 175/326 (53%), Gaps = 18/326 (5%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYG------AGMAVSEMMSCNPALWKTAKS 63
           L++G+  L + ++ +P+AGV+DR FR+L  R        A MA + +       W+    
Sbjct: 19  LQVGSLILHSRVLQSPLAGVSDRSFRQLVRRSAPQSLIFAEMAHAGLQLAGRDRWEF--- 75

Query: 64  QNRMVHEGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSAL 123
              + HE   G    Q+ G  P  +A AAQ +   GA  ID+NMGCP  KV +K  GSAL
Sbjct: 76  ---LPHEQPIG---AQLFGDQPATLAAAAQQAEAAGAVCIDLNMGCPVSKVTRKRGGSAL 129

Query: 124 LRYPDVIEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRA 183
           LR P++   I++AV  AV++PVT+KTR GW+      L  AQ  E  G Q L LHGR+R+
Sbjct: 130 LREPELAIAIVQAVAAAVSIPVTVKTRLGWE--QVTILDFAQQLEAAGAQLLTLHGRSRS 187

Query: 184 CMYKGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIF 243
             Y G+A+++ I  VK+ +SIPVIANGDI+SP  A   L+ TGAD +M GR + G P + 
Sbjct: 188 QGYSGQADWNWITRVKSRLSIPVIANGDINSPADAIACLQQTGADGVMCGRGSLGNPGLV 247

Query: 244 QEIQHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQAS 303
             I   L+ G   PEL + +   +   H+  L +  G   G   ARKH+ WYL +     
Sbjct: 248 GAIDRSLKTGEQTPELELRDRLQLAREHLLLLWEDKGA-AGLLQARKHLGWYLADQPDYQ 306

Query: 304 AFRRTFNAIETADQQLDALEGYFDNV 329
             R+     E   Q LD L+    +V
Sbjct: 307 DLRQHLLRSEDLSQSLDLLDAAIASV 332