Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., tRNA-dihydrouridine synthase B (RefSeq) from Shewanella amazonensis SB2B

 Score =  436 bits (1122), Expect = e-127
 Identities = 213/320 (66%), Positives = 259/320 (80%), Gaps = 1/320 (0%)

Query: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69
           ++IG YQL N LIVAPMAGVTD+ FR LCLRYGA MAVSEM+S NP LW T KS+ RM H
Sbjct: 1   MQIGPYQLTNQLIVAPMAGVTDQAFRNLCLRYGAAMAVSEMLSANPELWDTDKSRQRMAH 60

Query: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129
            GE GIRSVQIAG+DP+ MA AA+F+VE GAQIIDINMGCPAKKVNKK AGSAL++YPD+
Sbjct: 61  SGEEGIRSVQIAGADPEQMAWAARFNVEQGAQIIDINMGCPAKKVNKKQAGSALMQYPDL 120

Query: 130 IEDILKAVVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGE 189
           +E IL+AVV AV VPVTLK RTGW+ +++N + IA++AEDCGI +LA+HGRTR CMYKG 
Sbjct: 121 VEQILRAVVGAVEVPVTLKIRTGWEPEHRNGVQIARIAEDCGIASLAVHGRTRQCMYKGN 180

Query: 190 AEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHF 249
           AEYD+I+A+K +VSIPV+ANGDI SPEKAR+VL+YTGADALMIGR AQGRPWIF+EIQHF
Sbjct: 181 AEYDTIRAIKQSVSIPVVANGDIVSPEKARFVLDYTGADALMIGRGAQGRPWIFREIQHF 240

Query: 250 LEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTF 309
           L+ G  +  +   E + +ML H++ L+  YGE+ G R ARKH+ WYL + EQ   FR  F
Sbjct: 241 LDTGEQLAPVGDEEKRRVMLEHLSKLYDLYGEFKGIRFARKHMGWYLDQDEQRD-FRSQF 299

Query: 310 NAIETADQQLDALEGYFDNV 329
           NA+ETA +Q  A+E YFD +
Sbjct: 300 NALETAAEQRSAVERYFDEL 319