Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 17  LKNNLIVAPMAGVTDRPFRELC-LRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGI 75
           L     VAPM   TDR +R    L     +  +EM++    L       + + +  E   
Sbjct: 5   LNRTFSVAPMLDWTDRHYRYFARLMSKEALLYTEMVTTGAILHGKG---DYLAYNQEEHP 61

Query: 76  RSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILK 135
            ++Q+ GSDP+ +A  A+ +   G   ++IN+GCP+ +V     G+ L+  P ++ + + 
Sbjct: 62  LALQLGGSDPKDLATCAKLAEARGYDEVNINVGCPSDRVQNGRFGACLMAEPKLVAECVD 121

Query: 136 AVVNAVNVPVTLKTRTGWDTDNKN--CLSIAQLAEDCGIQALALHGRTRACMYKGEAE-- 191
           A+   V+VPVT+KTR G D  +         +     G     +H R          E  
Sbjct: 122 AMRQQVSVPVTVKTRIGIDEQDSYGFLTDFVETVSAAGCDTFIIHARKAWLQGLSPKENR 181

Query: 192 ------YDSIKAVKAAV-SIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQ 244
                 Y+ +  +K     + +  NG + S E+A+  L     D +M+GR A   P+I  
Sbjct: 182 EIPPLDYERVYQLKRDYPQLSISINGGVTSIEQAKTHL--AQLDGVMVGREAYQNPYILA 239

Query: 245 EI 246
            +
Sbjct: 240 SV 241