Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., NifR3/Smm1 family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  121 bits (304), Expect = 2e-32
 Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 12/230 (5%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTA-------KSQNRMVHEGE 72
           +I+APM GV D   REL        + V+E +     L           + +N  + +  
Sbjct: 8   IILAPMEGVLDHLMRELLSSINPYDLLVTEFVRVVDQLLPEKVYYRLCPELKNNGLTKSG 67

Query: 73  SGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132
           + +R VQI G +P  MAE A  +V  G++ +D N GCPAK VN+   G+ LL+YP++I D
Sbjct: 68  TPVR-VQILGQEPGWMAENALRAVTLGSRGVDANFGCPAKMVNRSKGGAVLLQYPELIHD 126

Query: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEA 190
           I+KA+  AV    PVT K R G++ D    +  A    + G   LA+H R++   YK  A
Sbjct: 127 IVKAMRQAVPSEQPVTAKIRLGYE-DKSLFMENALAVYEAGATELAIHARSKVDGYKPPA 185

Query: 191 EYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRP 240
            ++ I  V+  + IPVIANG+I + + A   +E TG D++MIGR A   P
Sbjct: 186 YWEYITEVRERLPIPVIANGEIWNRDDALRCMEVTGCDSIMIGRGALSMP 235