Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  230 bits (587), Expect = 4e-65
 Identities = 130/300 (43%), Positives = 183/300 (61%), Gaps = 5/300 (1%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMV----HEGESGIR 76
           +++APMAGVTD PFR L   YG  ++ +EM++    L + A+  +  +      G +G  
Sbjct: 14  IMLAPMAGVTDSPFRRLAHDYGCPLSWTEMVASRELLRERARGVDPRLGGGAEAGRAGPF 73

Query: 77  SVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKA 136
           +VQ+AG DP +MAEAA+     GA++IDINMGCP +KV   L GSAL+R   +   IL+A
Sbjct: 74  AVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAARILEA 133

Query: 137 VVNAVNVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIK 196
           VV AV +PV+LK R GWD  ++N + +A+LAE  GI  L +HGRTRA MY G A++ +I 
Sbjct: 134 VVGAVTLPVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIG 193

Query: 197 AVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLEHGT-T 255
            VK AVS+PVIANGD+ +  +AR +L  TGAD +MIGR A G PW+   I   +  GT  
Sbjct: 194 LVKRAVSLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAIARAIAAGTRE 253

Query: 256 MPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTFNAIETA 315
            P   ++E   +M  H+  L   +G   G + +RKH+ WY +   Q + FR  + A   A
Sbjct: 254 TPPPALAERAAVMAAHLEGLLACHGLERGLKTSRKHMGWYARTMPQGADFRAAYMAAADA 313