Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Rhodopseudomonas palustris CGA009

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 24/299 (8%)

Query: 23  VAPMAGVTD---RPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQ 79
           VAPM   TD   R F  L  R   G+  +EM++    +      Q  +  +      ++Q
Sbjct: 11  VAPMMDWTDSHCRVFHRLLTR--RGLLYTEMVTTGAVIH--GDRQRLLGFDASEHPVALQ 66

Query: 80  IAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVN 139
           + GS+P  +A +A+   + G   I+IN+GCP+ +V +   G+ L+  P+++ + + A+  
Sbjct: 67  LGGSNPNDLATSAKIGEDFGYDEININVGCPSDRVKEGRFGACLMAEPELVAEGVAAMKR 126

Query: 140 AVNVPVTLKTRTGWDTDNKNCL--SIAQLAEDCGIQALALHGR--------TRACMYKGE 189
           AV+VPVT+K R G D  +      ++A+     G  AL +H R         +   +   
Sbjct: 127 AVSVPVTVKCRIGIDDQDPEVALDALARAVVAAGADALIVHARKAWLNGLSPKENRHIPP 186

Query: 190 AEYDSIKAVKAAV-SIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQH 248
            +YD +  +K A+  +P+I NG I S  +A+  LE+   D +M+GR A   PW   E+  
Sbjct: 187 LDYDRVYRLKQAMPQVPIIINGGIGSIAEAKRHLEH--VDGVMLGRAAYQEPWRLLEVDP 244

Query: 249 FLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRR 307
            L +G T P   + E  + ++ ++    +   + L      +HV    Q    A AFRR
Sbjct: 245 EL-YGETAPYPSMKEALEALIPYI---ERQLAQGLRLHAITRHVIGAYQGVPGARAFRR 299