Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., dihydrouridine synthase, DuS (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 2e-33
 Identities = 98/317 (30%), Positives = 153/317 (48%), Gaps = 28/317 (8%)

Query: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRS-- 77
           +I+APM GV D P R L    G   M +SE +     L    K   R+  E +   R+  
Sbjct: 3   VILAPMEGVADAPMRALLTSVGGYDMVISEFIRVVDQLLPE-KVFYRLCAELKYQCRTAS 61

Query: 78  -----VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132
                +Q+ G +P  MAE A  +VE G++ +D+N GCPA  VN+   G+ALL+ P+ I  
Sbjct: 62  GTPVRLQLLGQEPNWMAENAIRAVELGSRGVDLNYGCPAPMVNRSKGGAALLKEPETIYR 121

Query: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEA 190
           + +AV  AV  + PV+ K R GWD D   C  IAQ  E  G   L +H RT+   Y+  A
Sbjct: 122 VTQAVRQAVPKDKPVSAKIRLGWD-DKSRCTEIAQAIEAAGATELTVHARTKEEAYRPPA 180

Query: 191 EYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFL 250
            ++ I  +K+   +P+IANG+I   E      E +G D +M+GR A   P     + H +
Sbjct: 181 HWEYIAQIKSVTRLPIIANGEIWGREDYLKCREASGCDDVMLGRGALTIP----NLAHVV 236

Query: 251 EHGTTMPELPISEVKDIMLGH-----VTALHQFYGEYLGPRIARKHVSWYLQEHEQASAF 305
           +   T   +P  EV  ++L +     V+   ++Y     P   ++ + +  + +E+  A 
Sbjct: 237 KGEQT--PMPWPEVLALLLQYSEFEIVSEKEKYY-----PARIKQWLRFIARHYEEGEAL 289

Query: 306 RRTFNAIETADQQLDAL 322
            R    ++     L  L
Sbjct: 290 FRQVRVLKDTQSILSLL 306