Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., putative TIM-barrel protein, nifR3 family from Dechlorosoma suillum PS

 Score =  350 bits (898), Expect = e-101
 Identities = 180/317 (56%), Positives = 236/317 (74%), Gaps = 1/317 (0%)

Query: 15  YQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESG 74
           + L+NNL VAPMAGVTDRPFR+LC   GAG+AVSEM++ N  L+ + K+Q R  HEGE  
Sbjct: 6   FTLRNNLFVAPMAGVTDRPFRQLCKTLGAGLAVSEMVTSNSLLYGSKKTQRRANHEGEVA 65

Query: 75  IRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDIL 134
             SVQIAG+DP +MAEAA+++V+NGAQIIDINMGCPAKKV   +AGSAL++   ++  IL
Sbjct: 66  PISVQIAGADPAMMAEAAKYNVDNGAQIIDINMGCPAKKVCNVMAGSALMQDEVLVGRIL 125

Query: 135 KAVVNAV-NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYD 193
           +AVV AV + PVTLK RTGW+  NKN  +IA++AE  GI+A+A+HGRTRA  Y GEAEY+
Sbjct: 126 EAVVGAVPDTPVTLKFRTGWNRLNKNAPTIARIAEASGIRAVAIHGRTRADQYTGEAEYE 185

Query: 194 SIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLEHG 253
           +I  VK+ + IPVIANGDI +PEKAR+VLE TGAD +MIGR AQGRPWIF+EI+HFL+ G
Sbjct: 186 TIALVKSQIGIPVIANGDITTPEKARHVLEVTGADGVMIGRAAQGRPWIFREIEHFLKTG 245

Query: 254 TTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTFNAIE 313
             +P   + E+  I+  H+  L+ FYG   G +IARKH+SWY +    ++AFR+T N + 
Sbjct: 246 EHLPPPRVEEIHRILQEHLQDLYAFYGIETGVKIARKHISWYTKGLVGSAAFRKTMNQLM 305

Query: 314 TADQQLDALEGYFDNVA 330
             D Q  A+  +F ++A
Sbjct: 306 ELDAQQAAVNEFFASLA 322