Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., dihydrouridine synthase DuS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  117 bits (293), Expect = 4e-31
 Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 2/302 (0%)

Query: 23  VAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIAG 82
           +AP+AG +D PFR LC  +GA    +EM+S    L+ +  +++ +    E     +Q+ G
Sbjct: 24  LAPLAGYSDLPFRLLCREHGAAACCTEMVSAKGLLYHSPGTRDLLASTPEDAPLVLQLFG 83

Query: 83  SDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVN-AV 141
           +D  +M       +E G +  D+NMGC   KV K   GSA+ R  D    + +A+V  A 
Sbjct: 84  ADADIMRTVMPGLLEQGFRWFDLNMGCSVPKVVKTGCGSAMSRDMDNALSVARAMVEVAG 143

Query: 142 NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAA 201
              V  K R GW    +    +A   +D G   + LH R     + GEA + +++ + A 
Sbjct: 144 EGRVGFKMRLGWQAGEETWREMALRLQDAGAGWITLHPRFARQGFGGEARWSALRELAAT 203

Query: 202 VSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLEHGTTMPELPI 261
           ++IPVIA+GD+ +   A   +  TG   +M  R A   P +F E +  L  G   P    
Sbjct: 204 LTIPVIASGDLFTAADAVRCVRETGVATVMFARGAMNNPAVFDEYRVLLAGGQPPPP-DA 262

Query: 262 SEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFRRTFNAIETADQQLDA 321
             +K ++  H+       GE       R  V  Y++      A R    +    D   + 
Sbjct: 263 DRLKALIRRHLELALAHSGERTALLKMRTFVPRYVRHIPGVRALRNRLASCLDRDLLEEL 322

Query: 322 LE 323
           LE
Sbjct: 323 LE 324