Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., tRNA-dihydrouridine synthase, TIM-barrel, YjbN from Marinobacter adhaerens HP15

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 14/231 (6%)

Query: 23  VAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIAG 82
           VAPM   T   +R L  +      +   M    AL     ++     E E  + ++Q+ G
Sbjct: 22  VAPMMDWTTSHYRYLARQLSRHTLLYTEMVTTGALIHGDTARFLRHDEAEYPL-ALQLGG 80

Query: 83  SDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAVN 142
           SD   +A  A+ + + G   +++N+GCP+ +V   + G+ L+ +PD + + ++A++ A +
Sbjct: 81  SDAGELAHCARLAQQYGFDEVNLNVGCPSDRVQNNMIGACLMGHPDKVAEGVRAMIEATD 140

Query: 143 VPVTLKTRTGWDTDNK--NCLSIAQLAEDCGIQALALHGRTRACMYKGEAE--------Y 192
           +PVT+K R G D      +     +   + G +   +H R          E        Y
Sbjct: 141 LPVTVKHRIGIDGRESWDDLCEFVEKVSEAGCRTFIVHARIAILEGLSPKENREVPPLKY 200

Query: 193 DSIKAVKAAV-SIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWI 242
           D +  +KA    + +I NG I +  +    L +T  D +M+GR A   PW+
Sbjct: 201 DWVYRLKAKYPHLEIIINGGIKTFGECHEHLRHT--DGVMLGREAYHNPWL 249