Pairwise Alignments

Query, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., tRNA-dihydrouridine synthase A from Burkholderia phytofirmans PsJN

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 18/274 (6%)

Query: 23  VAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIAG 82
           VAPM   TDR  R L         +   M    AL      ++      E+ + ++Q+ G
Sbjct: 14  VAPMMDWTDRHCRSLHRVISRHTWLYTEMVTTGALLHGDVPRHLAFTPEEAPV-ALQLGG 72

Query: 83  SDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAVN 142
           S+P  +A +A+   + G   I++N GCP+++V +   G+ L+  P ++ D +KA+ +AV+
Sbjct: 73  SEPDDLARSAKLGEQWGYDEINLNCGCPSERVQRGAFGACLMNEPQLVADCVKAMRDAVS 132

Query: 143 VPVTLKTRTGWDTDNKNCL---SIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVK 199
           VPVT+K R G D   +       +  +AE  G     +H R          E   I  +K
Sbjct: 133 VPVTVKHRIGVDAVEEYGFVRDFVGTIAE-AGCNVFIVHARNAILKGLSPKENREIPPLK 191

Query: 200 AAVS---------IPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFL 250
              +         + +I NG I + ++    LE+   D +M+GR A   P++  ++    
Sbjct: 192 YEYAYQLKRDFPQLEIIINGGIKTLDEVEAHLEH--VDGVMLGREAYHNPYVLADVDARF 249

Query: 251 EHGTTMPELPISEVKDIMLGHVTALHQFYGEYLG 284
            +G     L   +V+  ++ +  A     G YLG
Sbjct: 250 -YGAAQTPLTREQVEAKLIEYCAA-EMVRGTYLG 281