Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., LacI family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  137 bits (346), Expect = 3e-37
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 8/319 (2%)

Query: 7   ATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKA 66
           + +++VA   GV+  TVSR L+SP+ V   TR+K+  AVE  GY  N          +  
Sbjct: 2   SNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTGN 61

Query: 67  IGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLIL 126
           + IL+P+++N  FA  + G +   +A GY  LL       + E    A + A+Q DG+I 
Sbjct: 62  LVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTQGRAQIEREFAALVYAHQADGVIQ 121

Query: 127 TESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAY 186
             +     ++   A S +P+V   E+        + +D+  A+    + +I  G R I  
Sbjct: 122 LRASDPFESMPTGADS-LPLVNACEVVKGAPYPTISLDNRAAAQAMTEHLIGLGHRRIGI 180

Query: 187 F-GARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPDLD--- 242
             G R    T  R+ GY  A+ +AG+ I   L   H  F+L A   D A A     D   
Sbjct: 181 IKGPRSSPLTLDRVAGYQDALHQAGIAIDPSLI-CHGDFTLKAG-DDGAGAMLALADRPS 238

Query: 243 GVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKS 302
            +FC ND++AIG L   ++ G+RVPE +S++G++ +       P LT++  P    G+K+
Sbjct: 239 ALFCENDEMAIGALRRIKRMGLRVPEDISLVGFDDIPFAAYCDPPLTTISQPAEMFGQKA 298

Query: 303 AELLIAAL-KGERAEQQVV 320
            ++LIA + K   AE+ VV
Sbjct: 299 VQMLIALIEKKPIAERHVV 317