Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (549), Expect = 8e-61
 Identities = 118/328 (35%), Positives = 188/328 (57%), Gaps = 3/328 (0%)

Query: 6   RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSK 65
           R TL +VA   GV+ +T SR LR   +VA    EK+  A ++LGY+ N A   L+ S S+
Sbjct: 11  RPTLNEVAKLAGVSPITASRALRGISTVAPELVEKVRAAAQSLGYVANPAARALASSCSQ 70

Query: 66  AIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLI 125
            + +L+PSLSNQ+F   ++ I+ V +  G + L+ ++ Y  EEEE+ + + L  +  G++
Sbjct: 71  TVVVLVPSLSNQLFIETLEAIQDVLRVRGLDVLIGNYHYSPEEEEKLLRNHLVNRPRGIL 130

Query: 126 LTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIA 185
           LT   HT  + QM+ +SG+P V  MEL        VG    +A  +A   ++  G+R +A
Sbjct: 131 LTGFDHTAASRQMLETSGIPCVHMMELDTRLGAYCVGFSQQQAGAEAAHHLLGRGRRRLA 190

Query: 186 YFGARLDTRTKLRMQGYDQAMQEAGL--PIKHVLTGSHSSFSLAAQLLDEAFARYPDLDG 243
           Y  A+LD R   R +G+ + ++ AGL  P   V T   SS  L  +L      ++PD+DG
Sbjct: 191 YMAAQLDPRVLQRGEGFRRVLESAGLFDPALQVSTRQASSIGLGGELFARLLDQHPDVDG 250

Query: 244 VFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSA 303
           VF  NDD+A G  L A + G+ +PE++S++G+N L     + P+LTS+ +PR  +G+++A
Sbjct: 251 VFFCNDDLAQGAALEALRLGVAIPERVSLVGFNDLPGSAHMVPRLTSIRTPREEVGQRAA 310

Query: 304 ELLIAALKGERAEQQVVDMGYRFTAGES 331
           ++L+  L G     Q VD+G+     ES
Sbjct: 311 QVLLGLLDGISQHPQ-VDLGFELVVRES 337