Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  154 bits (388), Expect = 4e-42
 Identities = 99/332 (29%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 4   KQRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSS 63
           K+R T+ D+A   GV+K TVS  L++   V  +TR K+   +  LGY+ NR+ A L ++ 
Sbjct: 3   KERVTVVDIARAAGVSKSTVSLVLQASPLVNESTRAKVNAVIRELGYVYNRSAANLRQAR 62

Query: 64  SKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDG 123
           SK IGI++  L+N  FA    G++ V +  G+   LA+     + +   IAS+  + V G
Sbjct: 63  SKIIGIVVNDLTNSFFAELAVGVDEVVQTAGFVQFLANTSEKLDRQREVIASMREHGVSG 122

Query: 124 LILTESHHTQRT-LQMIASSGVPVVETM-ELPANPIDMAVGMDHVEASYQAVKKIIAAGK 181
           LI++ +  T+   L  + ++G+PVV  + ++P   +      +H  A   AV+ ++  G 
Sbjct: 123 LIISPARGTEAADLAPLVAAGIPVVLVVRDIPGAGVSSLTSDNHAGA-VAAVRHLVERGH 181

Query: 182 RSIAYFGARLDTRT-KLRMQGYDQAMQEAGLPIK-HVLTGSHSSFSLAAQLLDEAFARYP 239
           R +A+ G   DT   + RM+GY  A++EAGL +   ++ GS  S +     +++A     
Sbjct: 182 RRVAFLGGFADTAVFEARMRGYGDALREAGLEVSDDLIIGSAPSRAGGVTAIEQAMMLKE 241

Query: 240 DLDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIG 299
                 C ND +A G     + R +   E  +VIG++ +   +T  P LT+V      +G
Sbjct: 242 RPTAALCFNDAVAFGVCDGLRARRLEPGEDFAVIGFDDVIEAKTAVPALTTVSVDPQGMG 301

Query: 300 EKSAELLIAALKGERAEQQVVDMGYRFTAGES 331
           E++AELL+  +   R E + +    R    +S
Sbjct: 302 ERAAELLLKQINSGRVEPEAIVSPVRLAIRQS 333