Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  145 bits (366), Expect = 1e-39
 Identities = 94/323 (29%), Positives = 167/323 (51%), Gaps = 22/323 (6%)

Query: 3   KKQ--RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLS 60
           KKQ   AT++DVA +  V+  TVSR L +PD V+ +TR ++  A   +GY+       + 
Sbjct: 4   KKQVVAATMKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNMK 63

Query: 61  KSSSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQ 120
           ++ S+ I +++P + +  F+  ++GIE       Y  L+    +   +E+  I  ++  Q
Sbjct: 64  RNESRTILVIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITKQ 123

Query: 121 VDGLILTESH-------HTQRTL--QMIASSGVPVVETMELPANPIDMAVGMDHVEASYQ 171
           +DG++L  S          QR L   ++A+   P    +ELP       V +D++ A++ 
Sbjct: 124 IDGMLLLGSRLPFDAGVEEQRNLPPMVMANEFAP---ELELP------TVHIDNLTAAFN 174

Query: 172 AVKKIIAAGKRSIAYF-GARLDTRTKLRMQGYDQAMQEAGLPI-KHVLTGSHSSFSLAAQ 229
           AV  +   G R I    G         R+QGY QA++ +G+ +  H +   + ++   A 
Sbjct: 175 AVNYLHELGHRRIGCIAGPEEMPLCHYRLQGYVQALRRSGITVDPHYIARGNFTYEAGAS 234

Query: 230 LLDEAFARYPDLDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLT 289
            L++  A       +FC +D +A+G L +A++RG++VPE LS+IG++ + +     P LT
Sbjct: 235 ALEQLLALPVPPTAIFCHSDIMALGALSLAKRRGLKVPEDLSIIGFDNISLSEFCDPPLT 294

Query: 290 SVDSPRYAIGEKSAELLIAALKG 312
           +V  PR+ IG ++  LL+  L G
Sbjct: 295 TVAQPRFDIGREAMLLLLDQLHG 317