Pairwise Alignments

Query, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., LacI family transcription regulator from Burkholderia phytofirmans PsJN

 Score =  214 bits (546), Expect = 2e-60
 Identities = 116/327 (35%), Positives = 184/327 (56%), Gaps = 1/327 (0%)

Query: 6   RATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSK 65
           RAT+ DVAD   V+ MTVSR L+ P  ++   R ++  AV  LGY+ N A   L+ S S 
Sbjct: 37  RATIADVADLAQVSTMTVSRALKDPAQLSPEARARVEAAVTELGYVPNHAARTLATSRSH 96

Query: 66  AIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLI 125
            + +L+PSLSN +F   + GI+      GY+ L+ + GY   ++   +++ L++  DG +
Sbjct: 97  VVAVLVPSLSNTVFVDTLAGIQDCLGPAGYQILIGNTGYSSGKQAELVSTYLSHAPDGFL 156

Query: 126 LTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIA 185
           +T    ++   Q +A++ VPVV   +L   P + +VG     A +   K ++  G +   
Sbjct: 157 VTGIDGSEAIRQRLAAARVPVVHMYDLSRTPGEWSVGFSQQRAGFTLTKYLLERGYQCPG 216

Query: 186 YFGARLDTRTKLRMQGYDQAMQEAGL-PIKHVLTGSHSSFSLAAQLLDEAFARYPDLDGV 244
           +  A+LD RT  R  G+ +A++EAGL P   +LT   SS  L ++LL +  +  P  D +
Sbjct: 217 FVAAQLDPRTMQRRAGFRRALREAGLDPDVEILTDEPSSVGLGSKLLAQMLSHAPACDAI 276

Query: 245 FCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAE 304
           FC NDD+A+G L   Q+RGI VP ++++ G+N L      TP LT+V +PRY IG ++A 
Sbjct: 277 FCCNDDLALGALFECQRRGISVPGRIAIAGFNDLPPSAWSTPSLTTVTTPRYQIGFEAAR 336

Query: 305 LLIAALKGERAEQQVVDMGYRFTAGES 331
           LL+  L G   E+  +D+ +  T  ES
Sbjct: 337 LLLQILDGHPPERSCIDLRFTLTPRES 363