Pairwise Alignments

Query, 458 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., gluconate transporter (RefSeq) from Shewanella loihica PV-4

 Score =  218 bits (554), Expect = 4e-61
 Identities = 144/453 (31%), Positives = 229/453 (50%), Gaps = 12/453 (2%)

Query: 14  LTVAAVAIIALLLLII-RFKIHAFASLTLVSLGTAIATGVASDKVVSTMMTGFGGTLASV 72
           L +  +A+IA +++   +FK+H F +L L S   A A G+ S  V  T+ +GFGG L  +
Sbjct: 3   LVLILIAVIAFIVIATSKFKLHPFLTLILASFIAAFAYGLPSADVAKTITSGFGGILGYI 62

Query: 73  ALLVGLGAMIGKILEVTGGAKVLADTLIGRFGEQRAPFALGVASLLFGFPIFFDAGLIVM 132
            L++ LG +IG ILE +G A  +AD +I   G++     + +   L   P+F D+G +++
Sbjct: 63  GLVIVLGTIIGTILEKSGAAITMADVVIKVLGKRFPTLTMSIIGYLVSIPVFCDSGFVIL 122

Query: 133 MPIIFSVAKRFGGSPLKYALPSAGAFAVMHAFVPPHPGPVAAAELLG--ANIGLLLIVGL 190
             +  S+A R   S +  ++  A      H FVPP PGP+AAA  LG  +N+GL++ VG+
Sbjct: 123 NSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPGPIAAAGNLGLESNLGLVIGVGI 182

Query: 191 LVAIPTWYLGAYLFGLYAGKKFDIPLSKAFFNTDAIIDEAK-----LPKFATVMTILVLP 245
            VA      G      +A  + D   ++   N     ++ K     LP  A     + +P
Sbjct: 183 FVAAVAALAGMLWANRFAHVEPDGEGAEELKNNVEDFEQLKAAYGELPSPAKAFAPIFVP 242

Query: 246 VLLIFMDTGLNTLAVAGMIDGKAPAVEFLRMLGKTPIALLITLLVCIAAFAKDYGMARLE 305
           +LLI +    +         G     + L  LG+   AL+I L + ++       +    
Sbjct: 243 ILLICLG---SIAKFPSQPLGDGALFDTLAFLGQPVNALMIGLFLSLSLLKSQDKIKEFS 299

Query: 306 KLCGDSLAPICAVILVTGAGGMFGGVLRASGIGSALAGVLSDTGMPVVVAAFVIATCLRV 365
                 L     ++L+TGAGG FG VL+A+ IG+ L   LS  G+ + +  F++A  L+ 
Sbjct: 300 DRISHGLVVAAPILLITGAGGAFGAVLKATEIGNFLGSSLSALGIGIFM-PFIVAAALKS 358

Query: 366 AQGSATVALTTTAALIAPTVAATTGLSDLDLCFIVISIAGGATVLSHFNDSGFWLVSRLM 425
           AQGS+TVAL  T+AL+AP +      SD+     V++I  GA  +SH NDS FW+V++  
Sbjct: 359 AQGSSTVALVATSALVAPMLGDIGLASDMGRVLTVMAIGAGAMTVSHANDSFFWVVTQFS 418

Query: 426 EMDEKTTLKTWTVMETLLGGIAFLIVATLSFIL 458
            M  K   K  T+   + G  A ++V  LS +L
Sbjct: 419 RMSVKQAYKAQTMATLIQGVTAMILVYLLSLVL 451